DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42565 and LOC4578069

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:XP_001238197.1 Gene:LOC4578069 / 4578069 VectorBaseID:AGAMI1_003991 Length:97 Species:Anopheles gambiae


Alignment Length:103 Identity:38/103 - (36%)
Similarity:46/103 - (44%) Gaps:18/103 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SPAHPNPVIPVMAQTMPVLQPVSVMHHQTTVLVDNTRQGTICPHCNARIRLRVEHHPTGSTYCMA 97
            ||.:..|...|.|.|.|  :|..|                :||.|:|.|..:.|......|:..|
Mosquito    11 SPPYVPPTRVVSATTGP--EPAQV----------------VCPSCHAEIVTQTEQEANTKTHIYA 57

  Fly    98 ALLCLFLCWPCVCAPCCCNCCYKTSQYCPNCNSCLGSF 135
            .||||.|||||||.|.||..|..|...||.|.|.:|.:
Mosquito    58 LLLCLALCWPCVCLPYCCTSCRDTVHRCPRCKSFIGVY 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 29/66 (44%)
LOC4578069XP_001238197.1 zf-LITAF-like 27..96 CDD:463165 32/87 (37%)

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