DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42565 and Litafd

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:XP_030105031.1 Gene:Litafd / 436336 MGIID:3643507 Length:135 Species:Mus musculus


Alignment Length:123 Identity:28/123 - (22%)
Similarity:44/123 - (35%) Gaps:21/123 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DSPPPYSDPFATAPPAEDVMQQNLASPAHPNPVIPVMAQTMPVLQPVSVMHHQTTVLVDNTRQGT 72
            ::||....|.:..|.:..|.......|..|...||.|..::||                    ..
Mouse    22 ETPPSSYPPSSRGPGSPGVYPVYNQVPPGPFTGIPYMPTSIPV--------------------QA 66

  Fly    73 ICPHCNARIRLRVEHHPTGSTYCMAALLCLFLCW-PCVCAPCCCNCCYKTSQYCPNCN 129
            :||:|..||.....:.|...|:.:.:.|.:|.|: .|...|.|.......:..||.|:
Mouse    67 VCPYCGNRIMTVTTYTPGLLTWLLCSGLFVFGCFLGCCLIPFCIRSTMDVTHSCPMCH 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 16/63 (25%)
LitafdXP_030105031.1 zf-LITAF-like 63..131 CDD:463165 18/82 (22%)

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