DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42565 and litaf

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_988970.1 Gene:litaf / 394567 XenbaseID:XB-GENE-1017030 Length:148 Species:Xenopus tropicalis


Alignment Length:135 Identity:39/135 - (28%)
Similarity:58/135 - (42%) Gaps:16/135 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SPPPYSDPFATAPPAEDVMQ----QNLASPAHPNPVIPVMAQTMPVLQPVSVMH---HQTTVLVD 66
            :||.|.:.....||...:.|    :|:::|       |.:.|.:|:..||:|..   .|...|.|
 Frog    19 APPSYEEATFHHPPYPPLHQGMDAKNMSNP-------PYIVQPVPMQPPVTVQTVYVQQAMTLYD 76

  Fly    67 NTRQGTICPHCNARIRLRVEHHPTGSTYCMAALLCLFLC-WPCVCAPCCCNCCYKTSQYCPNCNS 130
            ...| ..|..||:.|..|:|:......:.....|||..| ..|...|.|.:.......|||||::
 Frog    77 RPVQ-MCCRSCNSMITTRLEYSSGALAWLSCGGLCLLGCIGGCCLIPFCIDSLKDVDHYCPNCHA 140

  Fly   131 CLGSF 135
            .|||:
 Frog   141 LLGSY 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 21/67 (31%)
litafNP_988970.1 PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732 20..23 2/2 (100%)
zf-LITAF-like 76..146 CDD:463165 23/71 (32%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 101..123 5/21 (24%)

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