DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42565 and Y87G2A.18

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_001021834.1 Gene:Y87G2A.18 / 3564964 WormBaseID:WBGene00013604 Length:118 Species:Caenorhabditis elegans


Alignment Length:137 Identity:32/137 - (23%)
Similarity:48/137 - (35%) Gaps:32/137 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RVDSPPPYSDPFATAPPAEDVMQQNLASPAHPNPVIPVMAQTMPV-LQPVSVMHHQTTVLVDNTR 69
            :.|||..:.        .||| :||...|...|....:.::|.|. :.|:.:             
 Worm     4 KTDSPSNFE--------MEDV-EQNAPEPNPQNDSRYITSRTSPYNVMPIEM------------- 46

  Fly    70 QGTICPHCNARIRLRVEHHPTGSTYCMAALLC-----LFLC-WPCVCAPCCCNCCYKTSQYCPNC 128
               .||||...|...:|.......:.:.|:|.     ||:. |...|.|...:.....:..||.|
 Worm    47 ---DCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCCVPFFLDQLLDVNHSCPAC 108

  Fly   129 NSCLGSF 135
            ...||.|
 Worm   109 KKFLGRF 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 18/72 (25%)
Y87G2A.18NP_001021834.1 LITAF 43..117 CDD:197841 20/89 (22%)

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