DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42565 and Y41C4A.11

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_001333540.1 Gene:Y41C4A.11 / 29991192 WormBaseID:WBGene00012757 Length:101 Species:Caenorhabditis elegans


Alignment Length:90 Identity:27/90 - (30%)
Similarity:35/90 - (38%) Gaps:11/90 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VLQPVSVMHHQTTVLVDNTRQGTICPHCNARIRLRVEHHPTGSTYCMAALLCLF----LCWP-CV 109
            |:|||.|:.|........|....:||.|...|...|..| .|..:.   |:|.|    .||| .:
 Worm    12 VIQPVKVVRHVVKETPIKTPYLDVCPKCQTTIMTSVTTH-IGMCWW---LICFFGTFLFCWPILI 72

  Fly   110 CAPCCCNCCYKTSQYCPNCNSCLGS 134
            |  .|.:........||||...|.:
 Worm    73 C--LCFDVSKDVDHNCPNCGLLLAT 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 21/72 (29%)
Y41C4A.11NP_001333540.1 LITAF 31..98 CDD:197841 20/71 (28%)

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