DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42565 and CG30273

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_726223.1 Gene:CG30273 / 246520 FlyBaseID:FBgn0050273 Length:128 Species:Drosophila melanogaster


Alignment Length:123 Identity:41/123 - (33%)
Similarity:62/123 - (50%) Gaps:17/123 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QQNLASPAHPNPV-IPVMAQTMPVLQPVSVMHHQT----TVLVDNTRQGTI----------CPHC 77
            ||...:|.:|:.: .|...|.:.|..||.|:||.|    .|::.:  |..:          ||||
  Fly     5 QQPAGAPGYPHQMPPPSYEQVVHVQAPVRVVHHTTAPPPVVIIQH--QAVLPVGPDPTFITCPHC 67

  Fly    78 NARIRLRVEHHPTGSTYCMAALLCLFLCWPCVCAPCCCNCCYKTSQYCPNCNSCLGSF 135
            :.:...|||:.|:..|:||||:||:...|.|.|.|.|...|...:.:|.|||..:|.:
  Fly    68 HVQKLTRVEYSPSVKTHCMAAILCIVGLWCCACLPYCATSCMNANHFCGNCNKFVGVY 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 27/76 (36%)
CG30273NP_726223.1 zf-LITAF-like 57..126 CDD:463165 26/69 (38%)

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