DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42565 and litafd

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:XP_002939491.1 Gene:litafd / 100498168 XenbaseID:XB-GENE-22164436 Length:141 Species:Xenopus tropicalis


Alignment Length:127 Identity:37/127 - (29%)
Similarity:54/127 - (42%) Gaps:27/127 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PPPYSDPFATA--PPAEDVMQQNLASPAHPNPVIPVMAQTMPVLQPVSVMHHQTTVLVDNTRQ-- 70
            |||..:|.:.|  ||                   |.:..::|. |||:|....|.::|.:|.|  
 Frog    26 PPPAYNPSSGAVYPP-------------------PPVYNSIPG-QPVTVPPVVTPIIVTSTFQDT 70

  Fly    71 --GTICPHCNARIRLRVEHHPTGSTYCMAALLCLFLCW-PCVCAPCCCNCCYKTSQYCPNCN 129
              .|.||.|...|...:.::....|:.:..:|.:|.|| .|...|.|.:.|.....||||||
 Frog    71 PASTTCPSCRQNIITNIHYNIGLLTWLLFGILFIFGCWLGCCLIPFCVDSCKDVDHYCPNCN 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 22/67 (33%)
litafdXP_002939491.1 zf-LITAF-like 69..139 CDD:463165 20/64 (31%)

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