DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2852 and ppil4

DIOPT Version :10

Sequence 1:NP_611695.1 Gene:CG2852 / 37591 FlyBaseID:FBgn0034753 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_001121802.1 Gene:ppil4 / 554886 ZFINID:ZDB-GENE-030131-6251 Length:454 Species:Danio rerio


Alignment Length:163 Identity:60/163 - (36%)
Similarity:87/163 - (53%) Gaps:18/163 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VFFDITIGGEPAGRIEIGLFGKTVPKTVENFKELALKPQGEGYKGSKFHRIIKDFMIQGGDFTKG 95
            |..:.|:|.     |.|.|:.:..||...||.:|.   :.:.|.....|.:.:||:||.||.| |
Zfish     3 VLLETTLGD-----IVIDLYTEERPKASLNFLKLC---KIKYYNYCLIHNVQRDFIIQTGDPT-G 58

  Fly    96 DGTGGRSI----YGER---FEDENF-KLKHYGAGWLSMANAGKDTNGSQFFITT-KQTSWLDGRH 151
            .|.||.|:    ||::   ||.|.. ::||...|.:||.|.|.|.:||||.||| :...:|||.|
Zfish    59 TGRGGESVFCKLYGDQARFFESEKMPRIKHRKKGTVSMVNNGSDQHGSQFLITTGENVDYLDGVH 123

  Fly   152 VVFGKILSGMNVVRQIENSATDARDRPVKDVVI 184
            .|||::..||:|:.:|..:..|....|.:|:.|
Zfish   124 TVFGEVTEGMDVLAKINETFVDNDFIPFQDIRI 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2852NP_611695.1 cyclophilin 30..188 CDD:469651 60/163 (37%)
ppil4NP_001121802.1 cyclophilin_RRM 4..169 CDD:238902 59/162 (36%)
RRM_PPIL4 237..319 CDD:409681
SF-CC1 375..>454 CDD:273721
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.