DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2852 and CG5808

DIOPT Version :10

Sequence 1:NP_611695.1 Gene:CG2852 / 37591 FlyBaseID:FBgn0034753 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster


Alignment Length:159 Identity:58/159 - (36%)
Similarity:86/159 - (54%) Gaps:17/159 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GRIEIGLFGKTVPKTVENFKELA-LKPQGEGYKGSKFHRIIKDFMIQGGDFTKGDGTGGRSIYG- 105
            |.:.:.||....|....||.:|. ||    .|..:.||.:.:.|:.|.|| ..|.|.||.||:| 
  Fly    10 GDLTVDLFISERPIACLNFLKLCRLK----YYNFNLFHTVQQGFIAQTGD-PSGAGDGGSSIWGV 69

  Fly   106 -----ERFEDENF--KLKHYGAGWLSMANAGKDTNGSQFFITTKQ--TSWLDGRHVVFGKILSGM 161
                 :||.:..|  |:.|..||.||:.:|||:..|||||:|..:  || |||.|.|.|:::.|.
  Fly    70 VEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTS-LDGNHCVIGEVVEGH 133

  Fly   162 NVVRQIENSATDARDRPVKDVVIANSGTL 190
            .|:|::.::..|...||.:|:.|.::..|
  Fly   134 EVLRKLNDAIVDDSFRPYQDIRITHTVVL 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2852NP_611695.1 cyclophilin 30..188 CDD:469651 57/155 (37%)
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 58/159 (36%)
RRM_PPIL4 237..319 CDD:409681
PRK12678 344..>510 CDD:237171
U2AF_lg 467..>572 CDD:273727
Blue background indicates that the domain is not in the aligned region.

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