DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2852 and Ranbp2

DIOPT Version :10

Sequence 1:NP_611695.1 Gene:CG2852 / 37591 FlyBaseID:FBgn0034753 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_038954525.1 Gene:Ranbp2 / 294429 RGDID:1560047 Length:3114 Species:Rattus norvegicus


Alignment Length:139 Identity:80/139 - (57%)
Similarity:103/139 - (74%) Gaps:0/139 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VFFDITIGGEPAGRIEIGLFGKTVPKTVENFKELALKPQGEGYKGSKFHRIIKDFMIQGGDFTKG 95
            ||||:.:.|||.|||.:.||...||:|.|||:.|....:|.|:|.|.|||::.||:.||||.||.
  Rat  2956 VFFDVCVDGEPLGRIIMELFSNIVPQTAENFRALCTGEKGFGFKNSIFHRVVPDFICQGGDITKY 3020

  Fly    96 DGTGGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTKQTSWLDGRHVVFGKILSG 160
            :||||:||||::|:||||.|||.|.|.|||||.|::||.||||||.|:...||.:|||||.:..|
  Rat  3021 NGTGGQSIYGDKFDDENFDLKHTGPGLLSMANCGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDG 3085

  Fly   161 MNVVRQIEN 169
            |:.||:||:
  Rat  3086 MDTVRKIES 3094

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2852NP_611695.1 cyclophilin 30..188 CDD:469651 80/139 (58%)
Ranbp2XP_038954525.1 LapB <33..191 CDD:442196
TPR repeat 59..89 CDD:276809
RanBD1_RanBP2-like 1180..1296 CDD:270203
zf-RanBP 1345..1374 CDD:395516
RanBP2-type Zn finger 1350..1369 CDD:275375
zf-RanBP 1410..1438 CDD:395516
RanBP2-type Zn finger 1414..1433 CDD:275375
zf-RanBP 1473..1502 CDD:395516
RanBP2-type Zn finger 1477..1496 CDD:275375
zf-RanBP 1533..1563 CDD:395516
RanBP2-type Zn finger 1537..1556 CDD:275375
zf-RanBP 1596..1625 CDD:395516
RanBP2-type Zn finger 1600..1619 CDD:275375
zf-RanBP 1655..1683 CDD:395516
RanBP2-type Zn finger 1659..1678 CDD:275375
RanBD2_RanBP2-like 1902..2018 CDD:269998
RanBD3_RanBP2-like 2199..2315 CDD:270204
IR1-M 2529..2591 CDD:463488
IR1-M 2605..2665 CDD:463488
RanBD4_RanBP2-like 2815..2931 CDD:269999
cyclophilin_ABH_like 2954..3112 CDD:238907 80/139 (58%)
Blue background indicates that the domain is not in the aligned region.

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