DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2852 and rct1

DIOPT Version :10

Sequence 1:NP_611695.1 Gene:CG2852 / 37591 FlyBaseID:FBgn0034753 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_595894.1 Gene:rct1 / 2539942 PomBaseID:SPBC17G9.05 Length:432 Species:Schizosaccharomyces pombe


Alignment Length:182 Identity:55/182 - (30%)
Similarity:85/182 - (46%) Gaps:27/182 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VFFDITIGGEPAGRIEIGLFGKTVPKTVENFKELA-LKPQGEGYKGSKFHRIIKDFMIQGGDFTK 94
            |..:.|:|.     :.|.||.|..|||.|||.:|. ||    .|....|:.|..::..|.||...
pombe     3 VLIETTVGD-----LVIDLFVKEAPKTCENFLKLCKLK----YYNFCPFYNIQHNYTCQTGDPLG 58

  Fly    95 GDGTGGRSIY-----GERFEDENF--KLKHYGAGWLSMANA---GKDTN----GSQFFIT-TKQT 144
            ..|.|||.::     |.||....|  .|.|...|.:||:.|   .:|..    ||||.|| :...
pombe    59 PTGDGGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNL 123

  Fly   145 SWLDGRHVVFGKILSGMNVVRQIENSATDARDRPVKDVVIANSGTLPVSEAF 196
            ..||.|:.::|::..|.:.:.:|.::..|...:|.:|:.|.:  |:.:.:.|
pombe   124 EGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRIKH--TIILDDPF 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2852NP_611695.1 cyclophilin 30..188 CDD:469651 53/172 (31%)
rct1NP_595894.1 cyclophilin_RRM 4..176 CDD:238902 54/181 (30%)
RRM_PPIL4 241..323 CDD:409681
Blue background indicates that the domain is not in the aligned region.

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