DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and CTK1

DIOPT Version :10

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_012783.1 Gene:CTK1 / 853718 SGDID:S000001622 Length:528 Species:Saccharomyces cerevisiae


Alignment Length:427 Identity:145/427 - (33%)
Similarity:225/427 - (52%) Gaps:62/427 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MSHMLQQPSGSTPSNVGSSSSRT-----------------------------MSLMEKQKYIEDY 39
            :||:.:.|.....|...:||:.:                             :|::.:|:     
Yeast   119 LSHLPKGPKSVEKSRYNNSSNTSNDIKNGYHASKYYNHKGQEGRSVIAKKVPVSVLTQQR----- 178

  Fly    40 DFPYCDESNKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALREIRILQL 104
                  .::.|.::.::|:||:|:|:||: ....:|.||:||:.:..|:||||||::|||::||.
Yeast   179 ------STSVYLRIMQVGEGTYGKVYKAK-NTNTEKLVALKKLRLQGEREGFPITSIREIKLLQS 236

  Fly   105 LKHENVVNLIEICRTKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQQLLNGL 169
            ..|.||..:.||....       :.|.|::|::.::||:|||.|..|:.|..:.|.:.:|||.|:
Yeast   237 FDHPNVSTIKEIMVES-------QKTVYMIFEYADNDLSGLLLNKEVQISHSQCKHLFKQLLLGM 294

  Fly   170 YYIHSNKILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLG 234
            .|:|.|||||||:|.:|:||...|.||:.||||||     |..|:..|||||:||||||||||||
Yeast   295 EYLHDNKILHRDVKGSNILIDNQGNLKITDFGLAR-----KMNSRADYTNRVITLWYRPPELLLG 354

  Fly   235 DRNYGPPVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELELYKSIEL 299
            ..|||..|||||.||::.|::.::.|.||:.|.:|:..|.::.|:.|.:.||.:.::..:..| :
Yeast   355 TTNYGTEVDMWGCGCLLVELFNKTAIFQGSNELEQIESIFKIMGTPTINSWPTLYDMPWFFMI-M 418

  Fly   300 PKNQKRRV---KERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPMPSDLSKMLS 361
            |:...:.|   .|:.:..:.......|...||..|..||..|..||..|:|..:|.|..|   :.
Yeast   419 PQQTTKYVNNFSEKFKSVLPSSKCLQLAINLLCYDQTKRFSATEALQSDYFKEEPKPEPL---VL 480

  Fly   362 QHLQSMFEYLAQPRRSNQMRNYHQQLTTMNQKPQDNS 398
            ..|.|..||..:..|..:..|...  |..|.|...||
Yeast   481 DGLVSCHEYEVKLARKQKRPNILS--TNTNNKGNGNS 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 122/312 (39%)
CTK1NP_012783.1 STKc_CDK9_like 183..469 CDD:270832 122/299 (41%)

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