DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and CDKE;1

DIOPT Version :10

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_201166.1 Gene:CDKE;1 / 836481 AraportID:AT5G63610 Length:470 Species:Arabidopsis thaliana


Alignment Length:394 Identity:147/394 - (37%)
Similarity:208/394 - (52%) Gaps:68/394 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GSS--SSRTMSLMEKQKYIEDYDFPYCDESNKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKV 82
            |||  |:.:.|..||.::::.|:.           |.|||:||:|.||.||.|...|:.:|:||.
plant     4 GSSSRSNSSNSTSEKPEWLQQYNL-----------VGKIGEGTYGLVFLARTKTPPKRPIAIKKF 57

  Fly    83 LMDNEKEGFPITALREIRILQLLKHENVVNLIEICRTKATATNGYRSTFYLVFDFCEHDLAGLLS 147
            ....:.:|...||:|||.:|:.:.|||||.|:.:      ..|....:.||.||:.|:||..::.
plant    58 KQSKDGDGVSPTAIREIMLLREISHENVVKLVNV------HINFADMSLYLAFDYAEYDLYEIIR 116

  Fly   148 NM--NVKFSLG--EIKKVMQQLLNGLYYIHSNKILHRDMKAANVLI----TKHGILKLADFGLAR 204
            :.  .|..||.  .:|.::.||||||.|:|||.|:|||:|.:|:|:    .:|||:|:|||||||
plant   117 HHRDKVGHSLNTYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGDAEEHGIVKIADFGLAR 181

  Fly   205 AFSIP-KNESKNRYTNRVVTLWYRPPELLLGDRNYGPPVDMWGAGCIMAEMWTRSPIMQG----- 263
            .:..| |..|.|   ..|||:|||.||||||.::|...||||..|||.||:.|..|:.||     
plant   182 IYQAPLKPLSDN---GVVVTIWYRAPELLLGSKHYTSAVDMWAVGCIFAELLTLKPLFQGAEAKS 243

  Fly   264 --NTEQ-QQLTFISQLCGSFTPDVWP----------GVEELELYK--SIELPK----NQKRRVKE 309
              |..| .||..|.::.|..|.|.||          .|:.::.:|  |:.|..    |||     
plant   244 SQNPFQLDQLDKIFKILGHPTMDKWPTLVNLPHWQNDVQHIQAHKYDSVGLHNVVHLNQK----- 303

  Fly   310 RLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPMPSDLSKMLSQHLQSMFEYLAQP 374
                    ....|||.|:|..||.|||.|..||.|::|..||:|...:.:.||.::....|..:|
plant   304 --------SPAYDLLSKMLEYDPLKRITASQALEHEYFRMDPLPGRNAFVASQPMEKNVNYPTRP 360

  Fly   375 RRSN 378
            ..:|
plant   361 VDTN 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 131/342 (38%)
CDKE;1NP_201166.1 STKc_CDK8_like 24..333 CDD:270834 131/341 (38%)

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