Protein Alignment Cdk9 and Cdk13

DIOPT Version :10

• Sequence 1: NP_477226.2
• Gene: Cdk9 / 37586
• FlyBaseID: FBgn0019949
• Length: 404
• Species: Drosophila melanogaster
• Sequence 2: XP_006516829.1
• Gene: Cdk13 / 69562
• MGIID: 1916812
• Length: 1527
• Species: Mus musculus
• Alignment Length: 371
• Identity: 154/371 - (41%)
• Similarity: 223/371 - (60%)
• Gaps: 27/371 - (7%)

  Fly    48 NKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALREIRILQLLKHENVVN 112
            :|::.:..||:||:|:|:|||: |...:.||:|||.:|||||||||||:|||:||:.|.|::::|
Mouse   703 DKFDIIGIIGEGTYGQVYKARD-KDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSIIN 766

  Fly   113 LIEICRTKATATN--GYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQQLLNGLYYIHSN 175
            :.||...|..|.:  ..:..|||||::.:|||.|||.:..|.|:...||..|:||:.||.|.|..
Mouse   767 MKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNENHIKSFMRQLMEGLDYCHKK 831

  Fly   176 KILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLGDRNYGP 240
            ..||||:|.:|:|:...|.:|||||||||.:|   :|....|||:|:||||||||||||:..|.|
Mouse   832 NFLHRDIKCSNILLNNRGQIKLADFGLARLYS---SEESRPYTNKVITLWYRPPELLLGEERYTP 893

  Fly   241 PVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELELYKSIELPKNQKR 305
            .:|:|..|||:.|::|:.||.|.|.|..||..||::|||..|.|||.|.:|..:.:::..|..:|
Mouse   894 AIDVWSCGCILGELFTKKPIFQANQELAQLELISRICGSPCPAVWPDVIKLPYFNTMKPKKQYRR 958

  Fly   306 RVKERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPMPSDL-------------- 356
            :::|..  ........||.|.:|.|||.||..|:.||..:|. .|..||.:
Mouse   959 KLREEF--VFIPAAALDLFDYMLALDPSKRCTAEQALQCEFL-RDVEPSKMPPPERFLHAEAMHH 1020

  Fly   357 SKMLSQHL---QSMFEYLAQPRRSNQMRNYHQQLTTMNQKPQDNSM 399
            ||| ::.|   |...|..::.||..:.......|:|:....:|.|:
Mouse  1021 SKM-AESLPLWQDCHELWSKKRRRQKQMGMTDDLSTIKAPRKDLSL 1065

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cdk9	NP_477226.2	STKc_CDK9	37..347	CDD:270848	138/300 (46%)
Cdk13	XP_006516829.1	STKc_CDK12	697..998	CDD:270847	138/300 (46%)