DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and Cdk12

DIOPT Version :10

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001103096.1 Gene:Cdk12 / 69131 MGIID:1098802 Length:1484 Species:Mus musculus


Alignment Length:334 Identity:153/334 - (45%)
Similarity:213/334 - (63%) Gaps:15/334 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALREIRILQLLKHENVVN 112
            :|::.:..||:||:|:|:||:: |...:.||:|||.:|||||||||||:|||:||:.|.|::|||
Mouse   721 DKFDIIGIIGEGTYGQVYKAKD-KDTGELVALKKVRLDNEKEGFPITAIREIKILRQLVHQSVVN 784

  Fly   113 LIEICRTKATATN--GYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQQLLNGLYYIHSN 175
            :.||...|..|.:  ..:..|||||::.:|||.|||.:..|.||...||..|:||:.||.|.|..
Mouse   785 MKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLDYCHKK 849

  Fly   176 KILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLGDRNYGP 240
            ..||||:|.:|:|:...|.:|||||||||.::   :|....|||:|:||||||||||||:..|.|
Mouse   850 NFLHRDIKCSNILLNNSGQIKLADFGLARLYN---SEESRPYTNKVITLWYRPPELLLGEERYTP 911

  Fly   241 PVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELELYKSIELPKNQKR 305
            .:|:|..|||:.|::|:.||.|.|.|..||..||:||||..|.|||.|.:|..:.:::..|..:|
Mouse   912 AIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRR 976

  Fly   306 RVKERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPMPSDLSKMLS---QHLQSM 367
            |::|.. .:: .....||||.:|||||.||..|:..|..||.    ...:||||..   .|.|..
Mouse   977 RLREEF-SFI-PSAALDLLDHMLTLDPSKRCTAEQTLQSDFL----KDVELSKMAPPDLPHWQDC 1035

  Fly   368 FEYLAQPRR 376
            .|..::.||
Mouse  1036 HELWSKKRR 1044

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 143/300 (48%)
Cdk12NP_001103096.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..465
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..699
STKc_CDK12 715..1016 CDD:270847 143/300 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1044..1101 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1156..1199
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1219..1363
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1437..1484
Blue background indicates that the domain is not in the aligned region.

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