DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and cdk10

DIOPT Version :10

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001016575.1 Gene:cdk10 / 549329 XenbaseID:XB-GENE-5727031 Length:340 Species:Xenopus tropicalis


Alignment Length:312 Identity:132/312 - (42%)
Similarity:190/312 - (60%) Gaps:13/312 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 CDESNKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALREIRILQLLKHE 108
            |....::||:.:||:||:|.|::||:.|.| :.||:|||.||.||:|.||::||||.:|..|:|.
 Frog    13 CRSVKEFEKLNRIGEGTYGIVYRARDTKSN-EIVALKKVRMDKEKDGIPISSLREINLLLRLRHP 76

  Fly   109 NVVNLIEICRTKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQQLLNGLYYIH 173
            |:|.|.|:      ....:..:.:||..:||.|||.||.||...||..::|.:..|||.||.|:|
 Frog    77 NIVELKEV------VVGNHLESIFLVMGYCEQDLASLLENMQTPFSEAQVKCICFQLLTGLQYLH 135

  Fly   174 SNKILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLGDRNY 238
            .:.|:|||:|.:|:|:|..|.:|:||||||||||||..:    .|.:|||||||.||||||....
 Frog   136 ESFIVHRDLKVSNLLMTDKGCVKIADFGLARAFSIPAKQ----MTPKVVTLWYRAPELLLGSTTQ 196

  Fly   239 GPPVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELELYKSIELPKNQ 303
            ...:|||..|||:||:....|::.|.:|.||:..|.||.|:...::|||...|.|.....:.|..
 Frog   197 TTAIDMWAVGCILAELLAHKPLLPGGSEIQQIDLIIQLLGTPNENIWPGFSNLPLVGQYTVRKQP 261

  Fly   304 KRRVKERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPMPSD 355
            ...:|.:. |:: .:.|..||:.|...|||||..|:.:|...:|...|:|.:
 Frog   262 YNNLKHKF-PWL-SEAGLRLLNFLFMYDPKKRATAEDSLASSYFKEKPLPCE 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 129/302 (43%)
cdk10NP_001016575.1 STKc_CDK10 11..319 CDD:173742 132/312 (42%)

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