DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and cdk9

DIOPT Version :10

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_012823646.1 Gene:cdk9 / 448039 XenbaseID:XB-GENE-483721 Length:382 Species:Xenopus tropicalis


Alignment Length:390 Identity:274/390 - (70%)
Similarity:310/390 - (79%) Gaps:29/390 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KYIEDYDFPYCDESNKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALRE 98
            |..:..:||||||.:|||::||||||||||||||:.::..|| ||:|||||:|||||||||||||
 Frog     3 KNYDSVEFPYCDEVSKYERLAKIGQGTFGEVFKAKHRQTGKK-VALKKVLMENEKEGFPITALRE 66

  Fly    99 IRILQLLKHENVVNLIEICRTK----------ATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKF 153
            |:||||||||||||||||||||          |...|..:.|.:||||||||||||||||.:|||
 Frog    67 IKILQLLKHENVVNLIEICRTKNSLAHLVSPTANQYNRCKGTIFLVFDFCEHDLAGLLSNAHVKF 131

  Fly   154 SLGEIKKVMQQLLNGLYYIHSNKILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYT 218
            :|.|||||||.|||||||||.||||||||||||||||:.|:|||||||||||||:.||...|:||
 Frog   132 TLSEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNKYT 196

  Fly   219 NRVVTLWYRPPELLLGDRNYGPPVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPD 283
            ||||||||||||||||:|:||||:|:|||||||||||||||||||||||.|||.|||||||.||:
 Frog   197 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 261

  Fly   284 VWPGVEELELYKSIELPKNQKRRVKERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFW 348
            |||.|::.|||:.:||||.|||:|||||:.||||....||:||||.|||.:|||:|.||||||||
 Frog   262 VWPNVDKYELYQKLELPKGQKRKVKERLKAYVKDLYALDLIDKLLVLDPAQRIDSDDALNHDFFW 326

  Fly   349 TDPMPSDLSKMLSQHLQSMFEYLAQPRR---------SNQMRNYHQQLTTMNQKPQDNSMIDRVW 404
            :|||||||..|||.|.||||||||.|||         :||.||    ....||     |..|||:
 Frog   327 SDPMPSDLKNMLSTHNQSMFEYLAPPRRRGGHMPQQPANQARN----PAATNQ-----SEFDRVF 382

  Fly   405  404
             Frog   383  382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 238/319 (75%)
cdk9XP_012823646.1 STKc_CDK9 6..325 CDD:270848 238/319 (75%)

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