DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and Pitslre

DIOPT Version :10

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster


Alignment Length:386 Identity:143/386 - (37%)
Similarity:208/386 - (53%) Gaps:62/386 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 STPSNVGSSSSRTMS-----------LMEKQKYIEDYDFPYCDES-----------------NKY 50
            ::||:...|..|.|:           |.||||.:|: ..| ||:.                 .::
  Fly   496 ASPSSSTRSEERGMTQEQPEEKPEEKLKEKQKSLEE-QIP-CDDKGIPLPNYYPGVQGCRSVEEF 558

  Fly    51 EKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALREIRILQLLKHENVVNLIE 115
            :.:.:|.:||:|.|::|::|:.| :.||:|::.|:.||||||||:||||..|...:|.|:|.:.|
  Fly   559 QCLNRIEEGTYGVVYRAKDKRTN-EIVALKRLKMEKEKEGFPITSLREINTLLKGQHPNIVTVRE 622

  Fly   116 ICRTKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVK---FSLGEIKKVMQQLLNGLYYIHSNKI 177
            |      .........::|.|:.||||..|:..|..:   |..||:|.:.||||..:.::|.|.|
  Fly   623 I------VVGSNMDKIFIVMDYVEHDLKSLMETMKNRKQSFFPGEVKCLTQQLLRAVAHLHDNWI 681

  Fly   178 LHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLGDRNYGPPV 242
            ||||:|.:|:|::..||||:.||||||.:..|    ..:||:.|||||||.|||||....|..|:
  Fly   682 LHRDLKTSNLLLSHKGILKVGDFGLAREYGSP----IKKYTSLVVTLWYRAPELLLCSPVYSTPI 742

  Fly   243 DMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELELYKSI--------EL 299
            |:|..|||.||.....|:..|.:|..:|..|.:..|:....:|||..||...|::        |.
  Fly   743 DVWSVGCIFAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNMLSQNSQFTEY 807

  Fly   300 PKNQKRRVKERLRPYVKDQT---GCDLLDKLLTLDPKKRIDADTALNHDFFWTDPMPSDLS 357
            |.:|       ||.:.:::|   |..||..|||.|||:|:.||.||.|.||...|:|.|.|
  Fly   808 PVSQ-------LRKHFQEKTSEMGLSLLQGLLTYDPKQRLSADAALKHGFFKELPLPIDPS 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 127/340 (37%)
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 123/316 (39%)

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