DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and Cdk1

DIOPT Version :10

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_307878.4 Gene:Cdk1 / 1269259 VectorBaseID:AGAMI1_012530 Length:298 Species:Anopheles gambiae


Alignment Length:304 Identity:123/304 - (40%)
Similarity:174/304 - (57%) Gaps:26/304 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 YEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALREIRILQLLKHENVVNLI 114
            ::|:.|||:||:|.|:|.|.|. ..:.|||||:.::.|.||.|.||:|||.:|:.|||.|||:|.
Mosquito     4 FQKIEKIGEGTYGVVYKGRNKH-TGEIVAMKKIRLETEDEGIPSTAIREISLLKELKHRNVVSLK 67

  Fly   115 EICRTKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGE--IKKVMQQLLNGLYYIHSNKI 177
            ::...:        :..||:|:|...||...:.::..:..:..  :|..|.|:...:.:.|..::
Mosquito    68 DVLMEE--------NRLYLIFEFLSMDLKKYMDSLPPEKMIDADLVKSYMYQITAAMLFCHRRRV 124

  Fly   178 LHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLGDRNYGPPV 242
            ||||:|..|:||.|.|::|:|||||.|:|.||    ...||:.:||||||.||:|||...|..||
Mosquito   125 LHRDLKPQNLLINKEGVIKVADFGLGRSFGIP----VRNYTHEIVTLWYRAPEVLLGSLRYSCPV 185

  Fly   243 DMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELELYKSIELP----KNQ 303
            |:|..|||.|||.||.|:.||::|..||..:.::..:.|.|:||||..|..||| ..|    .|.
Mosquito   186 DIWSIGCIFAEMATRKPLFQGDSEIDQLFRMFRILRTPTDDIWPGVTSLPDYKS-SFPCWTQNNL 249

  Fly   304 KRRVKERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFF 347
            ..:|..      .|..|.|||.|.|..||..||.|...|.|.:|
Mosquito   250 ASQVSN------LDSAGIDLLQKCLIYDPMLRISAKKILEHKYF 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 122/302 (40%)
Cdk1XP_307878.4 STKc_CDK1_euk 3..287 CDD:270845 122/302 (40%)

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