DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk9 and cdk18

DIOPT Version :10

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_001919335.2 Gene:cdk18 / 100150007 ZFINID:ZDB-GENE-141215-51 Length:465 Species:Danio rerio


Alignment Length:325 Identity:135/325 - (41%)
Similarity:191/325 - (58%) Gaps:19/325 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RTMSLMEKQKYIEDYDFPYCDESNKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKE 89
            :.:|.|.::..:.|..|   .:...|.|:.|:|:||:..|||.|.|. .:..||:|::.:::| |
Zfish   113 KPLSRMSRRASLSDIGF---GKLETYVKLGKLGEGTYATVFKGRSKL-TENLVALKEIRLEHE-E 172

  Fly    90 GFPITALREIRILQLLKHENVVNLIEICRTKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKFS 154
            |.|.||:||:.:|:.|||.|:|.|.:|..|....|        |||::.:.||...|.|.....|
Zfish   173 GAPCTAIREVSLLKNLKHANIVTLHDIIHTDRCLT--------LVFEYLDSDLKQYLDNCGNLMS 229

  Fly   155 LGEIKKVMQQLLNGLYYIHSNKILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTN 219
            :..:|..|.|||.||.|.|..||||||:|..|:||...|.|||||||||||.|:|    ...|:|
Zfish   230 MHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINDKGELKLADFGLARAKSVP----TKTYSN 290

  Fly   220 RVVTLWYRPPELLLGDRNYGPPVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDV 284
            .|||||||||::|||...|..|:||||.|||:.||.|..|:..|:|.:::|..|.:|.|:.|.:.
Zfish   291 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLMGTPTEES 355

  Fly   285 WPGVEELELYKSIELPKNQKRRVKERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFWT 349
            |||:...|.:||...|:.:.:.:...: |.: |..|.|||..||..|.|:||.|:.:|.|.:|.|
Zfish   356 WPGITANEEFKSYLFPQYRAQALINHV-PRL-DTEGIDLLTALLLYDTKRRISAELSLRHSYFQT 418

  Fly   350  349
            Zfish   419  418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 131/309 (42%)
cdk18XP_001919335.2 STKc_PCTAIRE3 129..416 CDD:270853 130/305 (43%)

Return to query results.
Submit another query.