DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and cdk16

DIOPT Version :10

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_031762670.1 Gene:cdk16 / 100037876 XenbaseID:XB-GENE-5856779 Length:522 Species:Xenopus tropicalis


Alignment Length:301 Identity:128/301 - (42%)
Similarity:182/301 - (60%) Gaps:22/301 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 YEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALREIRILQLLKHENVVNLI 114
            |.|:.|:|:||:..|:|.|.|. .:..||:|::.:::| ||.|.||:||:.:|:.|||.|:|.|.
 Frog   192 YIKLDKLGEGTYATVYKGRSKL-TENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLH 254

  Fly   115 EICRTKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQQLLNGLYYIHSNKILH 179
            :|..|:.|.|        |||::.:.||...|.:.....:|..:|..:.|||.||.|.|..|:||
 Frog   255 DIIHTERTLT--------LVFEYLDKDLKQYLDDCGNLINLHNVKLFLYQLLRGLSYCHRRKVLH 311

  Fly   180 RDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLGDRNYGPPVDM 244
            ||:|..|:||.:.|.|||||||||||.|||    ...|:|.|||||||||::|||...|...:||
 Frog   312 RDLKPQNLLINEKGELKLADFGLARAKSIP----TKTYSNEVVTLWYRPPDILLGSTEYSTQIDM 372

  Fly   245 WGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELELYKSIELPKNQKRRVKE 309
            ||.|||..||.|..|:..|:|.::||.||.::.|:.|.:.|||:...|.:||...|:.....:::
 Frog   373 WGVGCIFYEMVTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPRYYPDPIQK 437

  Fly   310 ---RLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFF 347
               ||     |..|.:||.|||.|:.:.||.|:.|:.|.:|
 Frog   438 HAARL-----DSDGANLLTKLLQLEGRNRISAEEAMRHLYF 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 127/299 (42%)
cdk16XP_031762670.1 Protein Kinases, catalytic domain 189..485 CDD:473864 128/301 (43%)

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