DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qkr58E-2 and khdrbs2

DIOPT Version :10

Sequence 1:NP_523810.2 Gene:qkr58E-2 / 37562 FlyBaseID:FBgn0022985 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001072215.1 Gene:khdrbs2 / 779662 XenbaseID:XB-GENE-490722 Length:345 Species:Xenopus tropicalis


Alignment Length:349 Identity:115/349 - (32%)
Similarity:172/349 - (49%) Gaps:72/349 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 QKYMQELMTERSRMENHFPLAVKLIDEALERVQ--LNGRIPTRDQYADVYQQRTIKLSQKVHVPI 136
            :||:.|||.|:..::..|..|::|:||.:.:.|  ...:.....:|.|:...:.||||::|.:|:
 Frog     4 EKYLPELMAEKDSLDPSFVHAMRLLDEEIVKFQDSEGNKEDGEKKYLDIISNKNIKLSERVLIPV 68

  Fly   137 KD-KKFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHV 200
            |. .|||:|||||||:||||:||||||..|:.|||:.||:|:.:|||||.|.:||:|||:..|||
 Frog    69 KQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKIKEEELRKSDEAKHAHLSDELHV 133

  Fly   201 EVSTIAPPAEAYARVAYALAEIRRYLTPDKHDDIRQEQYREL-----MEDPEAAKKLTLRQLQQQ 260
            .:...|||.|||:|:::||.||:::|.||.:|:|||||.|||     .:|.|..|....|.::..
 Frog   134 LLEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNGSDDSERGKGTRGRGIRVP 198

  Fly   261 SNAAASGAGGGGGGGGGNGNGGAAGS--------------------------------------- 286
            |..:.:..|.......|.|.....|:                                       
 Frog   199 STPSRNRGGVISPAFPGRGASATRGAPITRGTISTVARGIPTPRAKAAPTTPGYRLPPPLTIETY 263

  Fly   287 ---GSNNGNG---NQRS----GGNYRQKFQQQSHYRHNEETVYFRSHNNAYHQPKPYVPAAQRGN 341
               |.::|.|   :::|    ..||..:.|..|.|...|......|:|: |.|        :..:
 Frog   264 DDYGYDDGFGEDYDEQSYDIYENNYNSQTQSVSEYYDYEHGTNEESYNH-YEQ--------EEWS 319

  Fly   342 AMHTTL------PPQAIVRASPPG 359
            ...:||      |.:|..|..|.|
 Frog   320 KSRSTLKAPLQRPARAGYREHPYG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-2NP_523810.2 KH-I_KHDRBS 124..224 CDD:411812 59/100 (59%)
khdrbs2NP_001072215.1 Qua1 5..57 CDD:465079 14/51 (27%)
KH-I_KHDRBS2 54..171 CDD:411897 66/116 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..224 8/45 (18%)
Sam68-YY 263..317 CDD:465182 14/62 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 321..345 7/23 (30%)

Return to query results.
Submit another query.