DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-2 and khdrbs1

DIOPT Version :10

Sequence 1:NP_523810.2 Gene:qkr58E-2 / 37562 FlyBaseID:FBgn0022985 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001017045.1 Gene:khdrbs1 / 549799 XenbaseID:XB-GENE-479347 Length:360 Species:Xenopus tropicalis


Alignment Length:315 Identity:103/315 - (32%)
Similarity:158/315 - (50%) Gaps:76/315 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KYMQELMTERSRMENHFPLAVKLIDEALERVQLNG--RIPTRDQYADVYQQRTIKLSQKVHVPIK 137
            ||:.|||.|:..::..|..|:.|:.:.:||::..|  :....|.|.|::..:.:||.:::.:|:|
 Frog     6 KYLPELMAEKDSLDPSFTHAMSLLGKEIERLKKGGDAKKDEEDTYLDLFSHKNMKLKERILIPVK 70

  Fly   138 -DKKFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHVE 201
             ..|||:|||:|||:||:::||||||..||.:||:.||:|:|:|||||...|.||:|||:.|||.
 Frog    71 LYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYSHLNMDLHVF 135

  Fly   202 VSTIAPPAEAYARVAYALAEIRRYLTP---------DKHDDIRQEQYRELM----EDPEAAKKLT 253
            :....||.|:|.|:|:|:.|::::|.|         |..|||.|||:.||.    ..||.::   
 Frog   136 IEVFGPPCESYTRMAHAMEEVKKFLVPLTPESFSYQDMMDDICQEQFMELSYLNGAPPEQSR--- 197

  Fly   254 LRQLQQQSNAAASGAGGGGGGGGGNGNGGAAGSGSNNGNGNQRSGGNYRQKFQQQSHYRHNEETV 318
                            ||..||...|.||...:.:.:..|  |:|                    
 Frog   198 ----------------GGTRGGPSRGRGGPPPAAAPSSRG--RAG-------------------- 224

  Fly   319 YFRSHNNAYHQP-KPYVP-------AAQRGNAMHTTLPPQAIVRASPPGMVVSAA 365
                       | :|.||       |..||.::...:||.:..|.:|.|....||
 Frog   225 -----------PLRPLVPRGAPGRGAISRGASVSRPVPPSSASRGAPAGRARGAA 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-2NP_523810.2 KH-I_KHDRBS 124..224 CDD:411812 51/100 (51%)
khdrbs1NP_001017045.1 Qua1 6..58 CDD:465079 15/51 (29%)
KH-I_KHDRBS1 57..162 CDD:411896 52/104 (50%)
Sam68-YY 282..330 CDD:465182
Blue background indicates that the domain is not in the aligned region.

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