DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-2 and Khdrbs2

DIOPT Version :9

Sequence 1:NP_001286724.1 Gene:qkr58E-2 / 37562 FlyBaseID:FBgn0022985 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_573498.1 Gene:Khdrbs2 / 170771 MGIID:2159649 Length:349 Species:Mus musculus


Alignment Length:312 Identity:110/312 - (35%)
Similarity:161/312 - (51%) Gaps:65/312 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 QKYMQELMTERSRMENHFPLAVKLIDEALERVQ-LNGRIPTRD-QYADVYQQRTIKLSQKVHVPI 136
            :||:.|||.|:..::..|..|.:|:.|.:|:.| .:|:....: :|.||...:.||||::|.:|:
Mouse     4 EKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPV 68

  Fly   137 KD-KKFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHV 200
            |. .|||:|||||||:||||:||||||..|:.|||:.||:|:.:|||||.|.:||||||:..|||
Mouse    69 KQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKEEELRKSGEAKYAHLSDELHV 133

  Fly   201 EVSTIAPPAEAYARVAYALAEIRRYLTPDKHDDIRQEQYRELMEDPEAAKKLTLRQLQQQSNAAA 265
            .:...|||.|||:|:::||.||:::|.||.:|:|||||               ||:|...:.:..
Mouse   134 LIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQ---------------LRELSYLNGSEE 183

  Fly   266 SGAGGGGGGGG--------GNGNGGAAGSGSNNGNG------------------------NQRSG 298
            ||.|.|..|.|        ..|.|||.......|.|                        ..|:.
Mouse   184 SGRGRGIRGRGIRITPTAPSRGRGGAVPPPPPPGRGVLTPRGTTVTRGALPVPPIARGVPTPRAR 248

  Fly   299 G-----NYR----------QKFQQQSHYRHNEETVYFRSHNNAYHQPKPYVP 335
            |     .||          :::.....|....:...:.:::|:|..|...||
Mouse   249 GTAAVPGYRAPPPPAHDAYEEYGYDDGYGGEYDDQTYEAYDNSYVTPTQSVP 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-2NP_001286724.1 SF1_like-KH 129..244 CDD:239088 66/115 (57%)
Khdrbs2NP_573498.1 Qua1 6..57 CDD:292891 15/50 (30%)
SF1_like-KH 61..180 CDD:239088 69/133 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..263 16/81 (20%)
Sam68-YY 267..321 CDD:293176 6/34 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 321..349
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845522
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8696
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.800

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