DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-2 and Sf1

DIOPT Version :10

Sequence 1:NP_523810.2 Gene:qkr58E-2 / 37562 FlyBaseID:FBgn0022985 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001104263.1 Gene:Sf1 / 117855 RGDID:620645 Length:639 Species:Rattus norvegicus


Alignment Length:407 Identity:95/407 - (23%)
Similarity:150/407 - (36%) Gaps:112/407 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 NADGEKAQPAPAVQKYMQELMTERSRMENHFPLAVKLIDE----ALERVQLNGRIPTRDQYADVY 121
            |.:.....|.|......:.|.|...|...      ||.:|    ..|.|.||   |.....|| |
  Rat    75 NPEDRSPSPEPIYNSEGKRLNTREFRTRK------KLEEERHTLITEMVALN---PDFKPPAD-Y 129

  Fly   122 QQRTIKLSQKVHVPIKDK--KFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKD---RAREE 181
            :....::|.||.:| :|:  :.|:||.|:||:||:|:.:::|...||:|.|:.|:|:   ..::.
  Rat   130 KPPATRVSDKVMIP-QDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDG 193

  Fly   182 ELRNSADAKYAHLNLPLHVEVSTIAPPAEAYARVAYALAEIRRYL-----TPDKHDDIRQEQYRE 241
            ::....|.       |||..|:     |.....|..|:.:||..|     ||:..:|:|:.|.||
  Rat   194 QMLPGEDE-------PLHALVT-----ANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRE 246

  Fly   242 LM--------EDPEAAKKLTLRQLQQQSNAAASGAGGGGGGGGGNGNGGAAGSGSNNGNGNQRSG 298
            |.        :|....:.....:.:..:|.......||.|....:                    
  Rat   247 LARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASD-------------------- 291

  Fly   299 GNYRQKFQQ-------QSHYRHNEETVYFRSHNNAYHQPKPYVPAAQRGNAMHTTLP----PQAI 352
                .|||:       |...|.::|  |..........|   |||:....:...|.|    |:..
  Rat   292 ----CKFQRPGDPQSAQDKARMDKE--YLSLMAELGEAP---VPASVGSTSGPATTPLASAPRPA 347

  Fly   353 VRAS---PPGMVVSAAS--------------FNGRNAGLGNAGGGG--IMANSIVATTGGGIG-- 396
            ..||   ||.::.:..|              ::|.:.|.....|||  ...:.:.:.|||..|  
  Rat   348 APASNPPPPSLMSTTQSRPPWMNSGPSENRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHP 412

  Fly   397 ------GAVPPNMRYRP 407
                  |..||.|:..|
  Rat   413 MQHNPNGPPPPWMQPPP 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-2NP_523810.2 KH-I_KHDRBS 124..224 CDD:411812 30/104 (29%)
Sf1NP_001104263.1 MSL5 17..257 CDD:227503 57/204 (28%)
ZnF_C2HC 278..293 CDD:197667 3/38 (8%)

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