DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-2 and Khdrbs1

DIOPT Version :10

Sequence 1:NP_523810.2 Gene:qkr58E-2 / 37562 FlyBaseID:FBgn0022985 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_569089.1 Gene:Khdrbs1 / 117268 RGDID:621459 Length:443 Species:Rattus norvegicus


Alignment Length:388 Identity:115/388 - (29%)
Similarity:173/388 - (44%) Gaps:121/388 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GGGSAAGTAGAGTGVVPTGVSGGTSNGEHENEHNANADGEKAQPAPAV-------------QKYM 77
            |||...|.|.|.....|..:...::.|.     :|...|  :.|.|.:             .||:
  Rat    47 GGGGPRGGARASPATQPPPLLPPSNPGP-----DATVVG--SAPTPLLPPSATAAAKMEPENKYL 104

  Fly    78 QELMTERSRMENHFPLAVKLIDEALERVQLNGRIPTRDQ--YADVYQQRTIKLSQKVHVPIKD-K 139
            .|||.|:..::..|..|::|:...:|::| .|.....|:  |.|::..:.:||.::|.:|:|. .
  Rat   105 PELMAEKDSLDPSFTHAMQLLSVEIEKIQ-KGESKKDDEENYLDLFSHKNMKLKERVLIPVKQYP 168

  Fly   140 KFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHVEVST 204
            |||:|||:|||:||:::||||||..||.:||:.||:|:|:|||||...|.||||||:.|||.:..
  Rat   169 KFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEV 233

  Fly   205 IAPPAEAYARVAYALAEIRRYLTPDKHDDIRQEQYREL-----MEDPEAAKKLTLRQLQQQSNAA 264
            ..||.||||.:|:|:.|::::|.||..|||.|||:.||     :.:|...:.:::|         
  Rat   234 FGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPEPSRGRGVSVR--------- 289

  Fly   265 ASGAGGGGGGGGGNGNGGAAGSGSNNGNGNQRSGGNYRQKFQQQSHYRHNEETVYFRSHNNAYHQ 329
                          |.|.|                                             .
  Rat   290 --------------GRGAA---------------------------------------------P 295

  Fly   330 PKPYVPAAQRGNAMHTTLPPQ-AIVRAS-----------------PPGMVVSAASFNGRNAGL 374
            |.|.||   ||..:.   ||: |:||.:                 ||..|..|.:...|.||:
  Rat   296 PPPPVP---RGRGVG---PPRGALVRGTPVRGSITRGATVTRGVPPPPTVRGAPTPRARTAGI 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-2NP_523810.2 KH-I_KHDRBS 124..224 CDD:411812 54/100 (54%)
Khdrbs1NP_569089.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..95 12/54 (22%)
Involved in homodimerization. /evidence=ECO:0000250|UniProtKB:Q07666 100..260 72/160 (45%)
Qua1 102..153 CDD:465079 15/51 (29%)
KH-I_KHDRBS1 152..257 CDD:411896 55/104 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..317 16/110 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..345 4/18 (22%)
Interaction with HNRNPA1. /evidence=ECO:0000250|UniProtKB:Q07666 351..443 1/2 (50%)
Sam68-YY 366..415 CDD:465182
Interaction with ZBTB7A. /evidence=ECO:0000250|UniProtKB:Q07666 400..420
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 411..443
Blue background indicates that the domain is not in the aligned region.

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