DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wrapper and CG34353

DIOPT Version :10

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster


Alignment Length:486 Identity:131/486 - (26%)
Similarity:213/486 - (43%) Gaps:89/486 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ENSQKFKSIPTTVKTYENDTVQLPCTL-NTPFRYVRWHRDDVALVDSRHPELPPPDRIMLWPNGS 95
            :|...|.|...|.|....:|:.|||.: ||....|.|.| .:|::.:...::.|..|:.|....:
  Fly    83 KNEPMFISRSETFKFITGETIVLPCEVANTDTYVVAWKR-GIAILTAGSVKVTPDPRVRLVNGFN 146

  Fly    96 LQVANVQSSDTGDYYCEM-NSDSGHVVQQHAIEVQLAPQV-LIEPSDLTEQRIGAIFEVVCEAQG 158
            ||:.:...:|.|||.|:: ..|...:.  |.:|:.:.|:: .|......:.:.|:...:.|.|.|
  Fly   147 LQIRDALPTDAGDYICQIATMDPREIT--HTVEILVPPRIHHISTGGHLQVKKGSSVRIECSATG 209

  Fly   159 VPQPVITWRLNGNVIQPQSNTGNRQSLILEIKSRNQAGLIECVASNGVGEPAVANVYLHVLFSPE 223
            .|.|.:||....|::.......:...|.:|...|::.|:..|.|:|.||:||.:.|.||||||||
  Fly   210 NPMPNVTWSRKNNILPNGEEKLHSHVLSIENVDRHKGGVYICTANNRVGQPASSQVVLHVLFSPE 274

  Fly   224 VSIPQPVVYTKLGSRAHLECIVEAAPAATVKWFHHGLPVALGAHSTTHESELQTNRSVDHYVNAV 288
            :|:.:|||::..|..|.|.|||.......|.||...:.:     .||....::|..|        
  Fly   275 ISVERPVVFSGEGHEATLVCIVHGETQPEVIWFKDTMQL-----DTTERHIMETRGS-------- 326

  Fly   289 RHMLVVKSVRNADMGQYECRASNQISVKSGSVELTGRPMPCLFKINPGTQSSTSHVLVWQTESLL 353
            ||.|:::.|...|.|.|.|.|.||:.....:::|:|:|...:|...|.:|....:.:.|..:|..
  Fly   327 RHTLIIRKVHPQDFGNYSCVAENQLGKARKTLQLSGKPNVAVFNSPPISQYKDRYNISWAVDSHS 391

  Fly   354 PIMEFKLKFRQIP-------------------------------------SN------------- 368
            ||.|:||.||::|                                     ||             
  Fly   392 PIEEYKLSFRKLPQGHEVVGNAIDSSSSSSSMSSSSSQMYGSGLHAHRIGSNMGGLSGLSGSGSY 456

  Fly   369 ----NVTRQVRTNWTELTIPA-----QATNGLIYITTYTLHGLQPASLYEVSVLARNSFGWSDNS 424
                ||......:|..:.:||     ....|:    :|.:.||.|...||.:|.:||.:||||.:
  Fly   457 SGYGNVIHWGHNDWRNVVLPAVPVSHHYAQGM----SYMVRGLDPDQHYEATVQSRNRYGWSDLT 517

  Fly   425 KIVRFATG---GEVELPNY----STESELQD 448
            ....|:|.   |.|:|..:    .:::|::|
  Fly   518 NSFVFSTSSNDGPVDLSTFLNHGLSDNEMRD 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 IG_like 41..118 CDD:214653 23/78 (29%)
Ig strand B 52..56 CDD:409353 1/3 (33%)
Ig strand C 64..68 CDD:409353 1/3 (33%)
Ig strand E 94..98 CDD:409353 1/3 (33%)
Ig strand F 108..113 CDD:409353 3/4 (75%)
Ig strand G 122..125 CDD:409353 0/2 (0%)
Ig 133..219 CDD:472250 24/86 (28%)
Ig strand B 150..154 CDD:409353 0/3 (0%)
Ig strand C 163..167 CDD:409353 1/3 (33%)
Ig strand E 183..187 CDD:409353 1/3 (33%)
Ig strand F 197..202 CDD:409353 1/4 (25%)
Ig strand G 211..214 CDD:409353 0/2 (0%)
Ig_3 222..311 CDD:464046 28/88 (32%)
FN3 339..431 CDD:238020 32/150 (21%)
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 23/82 (28%)
Ig strand B 103..107 CDD:409353 1/3 (33%)
Ig strand C 116..120 CDD:409353 1/3 (33%)
Ig strand E 145..149 CDD:409353 1/3 (33%)
Ig strand F 159..164 CDD:409353 3/4 (75%)
Ig strand G 173..176 CDD:409353 1/4 (25%)
Ig 182..269 CDD:472250 24/86 (28%)
Ig strand B 201..205 CDD:409353 0/3 (0%)
Ig strand C 214..218 CDD:409353 1/3 (33%)
Ig strand F 248..253 CDD:409353 1/4 (25%)
Ig strand G 262..265 CDD:409353 0/2 (0%)
Ig_3 273..349 CDD:464046 28/88 (32%)
FN3 <466..524 CDD:238020 18/61 (30%)

Return to query results.
Submit another query.