back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment wrapper and dpr11

DIOPT Version :10

Sequence 1:	NP_477404.1	Gene:	wrapper / 37555	FlyBaseID:	FBgn0025878	Length:	500	Species:	Drosophila melanogaster
Sequence 2:	NP_788586.1	Gene:	dpr11 / 40800	FlyBaseID:	FBgn0053202	Length:	360	Species:	Drosophila melanogaster

Alignment Length:	250	Identity:	65/250 - (26%)
Similarity:	99/250 - (39%)	Gaps:	50/250 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   101 VQSSDTGD-----YYCEMNSDSGHVVQQHAIEVQLAPQVLIEP-------SDLTEQRIGAIFEVV 153
            :.|.::||     .:..:...|..:.:..|:.   |...|:||       |::|.| ||....:.
  Fly    78 ISSDESGDPSSATAFSSLAQVSSLLPEASALS---ATSGLVEPYLDGYATSNVTTQ-IGTHAYLP 138

  Fly   154 CEAQGVPQPVITW-RL-NGNVIQPQSNTGNRQSLI----------------LEIK--SRNQAGLI 198
            |..:.:....::| || :|:::     |.:|...|                |:||  ....||..
  Fly   139 CRVKQLGNKSVSWIRLRDGHIL-----TVDRAVFIADQRFLAIKQPDKYWTLQIKYVQARDAGSY 198

  Fly   199 ECVASNGVGEPAV-ANVYLHVLFSPEVSIPQPVVYTKLGSRAHLECIVEAA--PAATVKWFHHGL 260
            ||..|.   ||.| |.|.|.|:......:.:|..|.|.||...|.|||..|  |...:.|:|..
  Fly   199 ECQVST---EPKVSARVQLQVVVPRTEILGEPDRYVKAGSNVVLRCIVRGALEPPTFIMWYHGA- 259

  Fly   261 PVALGAHSTTHESELQTN-RSVDHYVNAVRHMLVVKSVRNADMGQYECRASNQIS 314
             ..|.|.|..|.::|..| ........:....|:::|.:..|.|.|.|..||..|
  Fly   260 -EQLAADSRRHRTQLDPNLPEASGEGQSTIGSLIIESAKKRDTGNYTCSPSNSPS 313

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.