DRSC/TRiP Functional Genomics Resources

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Protein Alignment wrapper and DIP-eta

DIOPT Version :10

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:XP_554132.4 Gene:DIP-eta / 1279644 VectorBaseID:AGAMI1_007770 Length:427 Species:Anopheles gambiae


Alignment Length:310 Identity:85/310 - (27%)
Similarity:131/310 - (42%) Gaps:35/310 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KFKSIPTTVKTYENDTVQLPCTLNTPFRY-VRWHR-DDVALVDSRHPELPPPDRIML-------W 91
            ||.:..:.|.........|.|.::....| |.|.| |...::..::..:....||.:       |
Mosquito    40 KFSTPISNVTAAVGREATLTCVVHDLGAYKVAWLRVDTQTILTIQNHVITKNKRIGITYTEKKTW 104

  Fly    92 PNGSLQVANVQSSDTGDYYCEMNSDSGHVVQQHAIEVQLAPQVLIEPSDLTEQ--RIGAIFEVVC 154
               .|::.:::.:|.|.|.|::|:|. ...|...::|.:.|.:|..|:. |:.  |.|:...:.|
Mosquito   105 ---QLRIKDIRETDRGWYMCQINTDP-MKSQMGYLDVVVPPDILDYPTS-TDMVVREGSNVTLRC 164

  Fly   155 EAQGVPQPVITWRLN-GNVIQPQSNTGNRQSLI------LEIKSRNQAGLIECVASNGVGEPAVA 212
            .|.|.|.|.|.||.. |:.|..|.  |.:.|.:      :...:|...|...|:|||||......
Mosquito   165 AAVGSPAPAIVWRREAGDNISLQD--GEQVSSVEGPTFTIPKVNRLHMGAYLCIASNGVPPSVSK 227

  Fly   213 NVYLHVLFSPEVSIPQPVVYTKLGSRAHLECIVEAAPAATVKWFHH-GLPVALGAHSTTHESELQ 276
            .|.|.|.|.|.:.:|..:|....|.|..|||..||.|.:...|... |..|..|.   .:|..| 
Mosquito   228 RVMLIVHFPPMIWVPNQLVGAVEGQRMTLECHSEAYPKSINYWTREKGDIVPQGG---KYEPVL- 288

  Fly   277 TNRSVDHYVNAVRHMLVVKSVRNADMGQYECRASNQISVKSGSVELTGRP 326
                :|:....|. .|.:|.|..||.|.|:|.|.|.:....|:::|...|
Mosquito   289 ----IDNAYKVVM-KLSIKVVSLADFGAYKCIAKNSLGETDGTIKLYKLP 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 IG_like 41..118 CDD:214653 18/85 (21%)
Ig strand B 52..56 CDD:409353 1/3 (33%)
Ig strand C 64..68 CDD:409353 2/4 (50%)
Ig strand E 94..98 CDD:409353 1/3 (33%)
Ig strand F 108..113 CDD:409353 2/4 (50%)
Ig strand G 122..125 CDD:409353 1/2 (50%)
Ig 133..219 CDD:472250 28/94 (30%)
Ig strand B 150..154 CDD:409353 0/3 (0%)
Ig strand C 163..167 CDD:409353 1/3 (33%)
Ig strand E 183..187 CDD:409353 1/9 (11%)
Ig strand F 197..202 CDD:409353 1/4 (25%)
Ig strand G 211..214 CDD:409353 0/2 (0%)
Ig_3 222..311 CDD:464046 28/89 (31%)
FN3 339..431 CDD:238020
DIP-etaXP_554132.4 None
Blue background indicates that the domain is not in the aligned region.

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