DRSC/TRiP Functional Genomics Resources

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Protein Alignment ari-2 and Rnf144a

DIOPT Version :10

Sequence 1:NP_477374.1 Gene:ari-2 / 37542 FlyBaseID:FBgn0025186 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001075879.1 Gene:Rnf144a / 500636 RGDID:1561737 Length:292 Species:Rattus norvegicus


Alignment Length:216 Identity:63/216 - (29%)
Similarity:97/216 - (44%) Gaps:16/216 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 TTASATPQYRSQM-----CPVCASSQLGDKFYSLA-CGHSFCKDCWTIYFETQIFQGISTQIGCM 198
            |||...|.:...:     |.:|......::..::| |...||..|...|.|..|.:|:.|.|.|.
  Rat     2 TTARYRPTWDLALDPLVSCKLCLGEYPAEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCP 66

  Fly   199 AQMC--NVRVPEDLVLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQIIVQSSEI---SA 258
            ...|  ...:.|:.:..:|...:|: :|::..|:..|...|...:||...||.:.|..:|   :.
  Rat    67 DAACPKQGHLQENEIECMVAAEIMQ-RYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDIGLQTP 130

  Fly   259 KRAICKACHTGFCFRCGMDYHAPTDCQVIKKWLTKCADDSETANYI---SAHTKDCPKCHICIEK 320
            :...||||...||..|...:|....|..... ::....::.:|..:   .|..|.||||.:.||:
  Rat   131 QLVQCKACDMEFCSACKARWHPGQGCPETMP-ISFLPGETSSAFKVEEGDAPIKRCPKCRVYIER 194

  Fly   321 NGGCNHMQCFNCKHDFCWMCL 341
            :.||..|.|.||||.|||.||
  Rat   195 DEGCAQMMCKNCKHAFCWYCL 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ari-2NP_477374.1 RING-HC_RBR_TRIAD1 152..204 CDD:438429 15/59 (25%)
BRcat_RBR_TRIAD1 231..302 CDD:439005 17/73 (23%)
Rcat_RBR_TRIAD1 306..361 CDD:439021 21/36 (58%)
Ariadne 371..>477 CDD:466073
Rnf144aNP_001075879.1 mRING-HC-C4C4_RBR_RNF144A 18..72 CDD:438433 15/53 (28%)
BRcat_RBR_RNF144A 99..163 CDD:439027 17/64 (27%)
Rcat_RBR_RNF144 179..247 CDD:439013 21/37 (57%)
Blue background indicates that the domain is not in the aligned region.

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