DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3045 and Pus1

DIOPT Version :10

Sequence 1:NP_611646.1 Gene:CG3045 / 37531 FlyBaseID:FBgn0034703 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001020734.1 Gene:Pus1 / 304567 RGDID:1311871 Length:423 Species:Rattus norvegicus


Alignment Length:387 Identity:87/387 - (22%)
Similarity:145/387 - (37%) Gaps:93/387 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 KEYSGLIGNEAEGKVSQVAKTSSKVQKIRKFDWSSAHKRHVLLKITYFGWDYQGFACQEDSND-- 123
            |...|.:..|.|....:| |.....:..||..     ||.::|.:.|.|..|.|......|:.  
  Rat    48 KGRGGWVWEETEHPAKRV-KGGEDEEPPRKLP-----KRKIVLLMAYSGKGYHGMQRNLGSSQFR 106

  Fly   124 TIESNLFRALART-CLIESRATS----NYHRCGRTDKEVSAFCQVISI------DLRSKHPPESQ 177
            |||.:|..||.:. |:.|:..|.    ::.||.||||.|||..||:|:      |:..|      
  Rat   107 TIEDDLVSALVQAGCIPENHGTDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDILDK------ 165

  Fly   178 LDPTALSSEIDYCGLLNRVLPKNIQCVAWMPLRSPVYSARFDCVSRTYRYYFP-----KGDLDI- 236
                           :|..||.:|:.:....:... ::::..|.:|||.|..|     ..|.|: 
  Rat   166 ---------------INSHLPSHIRILGLKRVTGG-FNSKNKCDARTYCYMLPTFAFAHKDRDVQ 214

  Fly   237 --------AAMRKACDLLVRHADFRNFCKMDVHNGVTNYMRNLQSAR---VEACDQTNHTNSGYD 290
                    ..:::...||..:....||     ||..:.......|||   :|...:......|.:
  Rat   215 DESYRLSAETLQQVNRLLGCYKGTHNF-----HNFTSQKGPREPSARRYILEMYCEEPFVREGLE 274

  Fly   291 MYYLEIQANAFLWHQIRCIMAVLLLVGQKKENPGVI-----SDLLDVESNPCKPQYTPAIGLPLN 350
            ...::::..:|:.||||.::.:::.:.:......|:     .:.:||...|         ||.|.
  Rat   275 FAVIKVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSWGEEKVDVPKAP---------GLGLV 330

  Fly   351 LFRCDFRDHTTRSVNHPSSGDADEEAMDTAADESN-----------DLNAPEHLERDLTAWI 401
            |.|..|..:     |.....|...|.:|.|.:|..           .:.:.|..||.:..|:
  Rat   331 LERVHFEKY-----NQRFGSDGLHEPLDWAQEEGKVTAFKEQYIYPTIVSTERDERSMAQWL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3045NP_611646.1 PseudoU_synth_ScPus3 103..356 CDD:211336 66/287 (23%)
Pus1NP_001020734.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..75 6/27 (22%)
PseudoU_synth_PUS1_PUS2 84..336 CDD:211335 66/287 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..423
Blue background indicates that the domain is not in the aligned region.

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