Protein Alignment HmgZ and HMGB4

DIOPT Version :10

• Sequence 1: NP_726106.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: NP_179347.1
• Gene: HMGB4 / 816263
• AraportID: AT2G17560
• Length: 138
• Species: Arabidopsis thaliana
• Alignment Length: 111
• Identity: 35/111 - (31%)
• Similarity: 58/111 - (52%)
• Gaps: 11/111 - (9%)

  Fly     4 DRPKRPLSAYMLWLNETREQIKKDNPGSK-VTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEYN 65
            ::||||.||:.::|.:.|::....||.:| |..:.|..|..|:.:  :||..:..||...|.||.
plant    33 NQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYI 97

  Fly    66 KAVKEYEAN--GGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDE 109
            |.|::|...  .||:      |::..:..:|....:..||||.||:
plant    98 KNVQQYNLKLASGTN------REEDDSDKSKSEVDEAVSEEEAEDD 137

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_726106.1	HMG-box_SSRP1-like	8..72	CDD:438810	22/66 (33%)
HMGB4	NP_179347.1	HMG-box_AtHMGB1-like	36..96	CDD:438821	19/59 (32%)