Protein Alignment HmgZ and tfam

DIOPT Version :10

• Sequence 1: NP_726106.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: NP_001070857.1
• Gene: tfam / 571106
• ZFINID: ZDB-GENE-061013-552
• Length: 277
• Species: Danio rerio
• Alignment Length: 99
• Identity: 28/99 - (28%)
• Similarity: 59/99 - (59%)
• Gaps: 5/99 - (5%)

  Fly     6 PKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEYNKAV 68
            |||||:|||.::.:.:..:.|.||..|..|:.::..:.|:.|  :.|..::..:::.||:|..|:
Zfish    47 PKRPLTAYMTFVKDMQPTVSKQNPSIKSVDVMRKIAQQWKMLTTEQKQPFQVASLEAKEQYKLAL 111

  Fly    69 KEYEAN---GGTDSGAPKKRKKAAAKPAKKAKKK 99
            ::::|.   ..:.:.|.:||::.|.:.|.:.||:
Zfish   112 EKFKAQLTPAESAAFAEEKRQRVAKRKAIRKKKE 145

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_726106.1	HMG-box_SSRP1-like	8..72	CDD:438810	18/65 (28%)
tfam	NP_001070857.1	HMG-box_SF	49..107	CDD:438789	16/57 (28%)
		HMG-box_TFAM_rpt2	132..231	CDD:438803	4/14 (29%)