Protein Alignment HmgZ and Pbrm1

DIOPT Version :9

• Sequence 1: NP_001286694.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: XP_006252748.1
• Gene: Pbrm1 / 306254
• RGDID: 1565549
• Length: 1726
• Species: Rattus norvegicus
• Alignment Length: 77
• Identity: 22/77 - (28%)
• Similarity: 41/77 - (53%)
• Gaps: 4/77 - (5%)

  Fly    10 LSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLK--DKTEWEQKAIKMKE--EYNKAVKE 70
            :|.|:|:.:|.|..||..:|.....::::..|..||.|:  .|.|:|::|.|..|  |..:|.::
  Rat  1420 MSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAEYEERAAKAAEQQERERAAQQ 1484

  Fly    71 YEANGGTDSGAP 82
            .:.:....:|.|
  Rat  1485 QQPSASPRAGTP 1496

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_001286694.1	HMG_box	6..71	CDD:395407	20/64 (31%)
Pbrm1	XP_006252748.1	Bromo_polybromo_I	65..177	CDD:99954
		Bromo_polybromo_II	203..305	CDD:99948
		Bromo_polybromo_III	404..505	CDD:99951
		Bromo_polybromo_IV	556..659	CDD:99949
		Bromo_polybromo_V	695..799	CDD:99946
		Bromo_polybromo_VI	812..919	CDD:99956
		BAH_polybromo	994..1111	CDD:240068
		BAH_polybromo	1192..1310	CDD:240068
		HMG-box	1417..1481	CDD:238037	19/60 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910