Protein Alignment HmgZ and Hmgb3

DIOPT Version :9

• Sequence 1: NP_001286694.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: XP_003751730.1
• Gene: Hmgb3 / 305373
• RGDID: 1564407
• Length: 241
• Species: Rattus norvegicus
• Alignment Length: 108
• Identity: 47/108 - (43%)
• Similarity: 63/108 - (58%)
• Gaps: 11/108 - (10%)

  Fly     6 PKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKD--KTEWEQKAIKMKEEYNKAV 68
            ||||.|.:.|:.:|.|.:||..|||..:.|:||:.||:|..|.|  |..:..||.|:||:|.|.|
  Rat   134 PKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAKLKEKYEKDV 198

  Fly    69 KEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDESE 111
            .:|::.|..|         .|..|||.|:||...|||||:|.|
  Rat   199 ADYKSKGKFD---------GAKGPAKVARKKVEEEEEEEEEEE 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_001286694.1	HMG_box	6..71	CDD:395407	30/66 (45%)
Hmgb3	XP_003751730.1	HMG_box_2	54..119	CDD:286146
		HMG_box	134..201	CDD:278906	30/66 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.920