Protein Alignment HmgZ and pop-1

DIOPT Version :9

• Sequence 1: NP_001286694.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: NP_491053.4
• Gene: pop-1 / 171849
• WormBaseID: WBGene00004077
• Length: 438
• Species: Caenorhabditis elegans
• Alignment Length: 112
• Identity: 25/112 - (22%)
• Similarity: 54/112 - (48%)
• Gaps: 15/112 - (13%)

  Fly     4 DRPKRPLSAYMLWLNETREQIKKD--NPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEY 64
            |..|:||:|:|.::.|.|:.:.::  |...:..::.|..|:.|..|  :::.::.:.|.|.||.:
 Worm   190 DHVKKPLNAFMWFMKENRKALLEEIGNNEKQSAELNKELGKRWHDLSKEEQAKYFEMAKKDKETH 254

  Fly    65 NKAVKEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDESE 111
            .:...|:.|           |:..|....|..|:::.|...|.::.:
 Worm   255 KERYPEWSA-----------RENYAVNKKKTKKRRDKSIPSENNDQK 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_001286694.1	HMG_box	6..71	CDD:395407	16/68 (24%)
pop-1	NP_491053.4	SOX-TCF_HMG-box	191..264	CDD:238684	18/83 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910