DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twz and kctd9

DIOPT Version :10

Sequence 1:NP_001246449.1 Gene:twz / 37456 FlyBaseID:FBgn0034636 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001120488.1 Gene:kctd9 / 100145607 XenbaseID:XB-GENE-976411 Length:389 Species:Xenopus tropicalis


Alignment Length:128 Identity:38/128 - (29%)
Similarity:70/128 - (54%) Gaps:24/128 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 IDVGGTIYTSSLETL-TKYPESKLAKLFNGQIPIVLDSLKQH---YFIDRDGGMFRHILNFMRNS 199
            ::|||..:|::..|| :|.|:|.|:.:|:.:  ....:.|.|   :.|||....|..|||::|:.
 Frog    93 LNVGGRYFTTTRSTLVSKEPDSMLSHMFSDR--DAWGNKKDHTGAFLIDRSPEYFEPILNYLRHG 155

  Fly   200 RLLIAEDFPDLELLLEEARYYEVEPMIKQLE--------------SMRKDRVRNGNYLVAPPT 248
            :|:: .|..:|..:||||:::.::.:|:.||              ..||:.:|   :|:|.||
 Frog   156 QLIV-NDGVNLLGVLEEAKFFGIDSLIEHLELAIKNSQPADDHSPISRKEFIR---FLLATPT 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twzNP_001246449.1 BTB_POZ_KCTD1-like 137..230 CDD:349670 29/94 (31%)
kctd9NP_001120488.1 Ubl1_cv_Nsp3_N-like 2..66 CDD:475130
BTB_POZ_KCTD9 89..188 CDD:349677 31/97 (32%)
YjbI 222..377 CDD:440968
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.