DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEFSec and GCD11

DIOPT Version :9

Sequence 1:NP_611584.1 Gene:eEFSec / 37444 FlyBaseID:FBgn0034627 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_010942.1 Gene:GCD11 / 856746 SGDID:S000000827 Length:527 Species:Saccharomyces cerevisiae


Alignment Length:463 Identity:106/463 - (22%)
Similarity:183/463 - (39%) Gaps:116/463 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLV-----------DAPA 59
            |||.:|||..||:|:.:|:|.:.:....|:    :||.||:.||::...:           |...
Yeast   102 NIGTIGHVAHGKSTVVRAISGVQTVRFKDE----LERNITIKLGYANAKIYKCQEPTCPEPDCYR 162

  Fly    60 HLPQGEQL-----------------QFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKG-KQT 106
            .....:::                 ..:|||||||..|:.|::.||.::|..||::...:. .|.
Yeast   163 SFKSDKEISPKCQRPGCPGRYKLVRHVSFVDCPGHDILMSTMLSGAAVMDAALLLIAGNESCPQP 227

  Fly   107 QTAECLIIGELLQKKLIVVI-NKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQ 170
            ||:|.|...|:::.|.:::: ||:|:..|.   |.||..: .:.|.:..|...| .||..:||..
Yeast   228 QTSEHLAAIEIMKLKHVIILQNKVDLMREE---SALEHQK-SILKFIRGTIADG-APIVPISAQL 287

  Fly   171 GTHIAELREVLREAYFQPQRNLADPLFMYVDHCFGIKG--------QGTVCTGTLLQGKVQVNNV 227
            ..:|..:.|.:.:....|.|:......:.|...|.:..        :|.|..|::|.|..::.:.
Yeast   288 KYNIDAVNEFIVKTIPVPPRDFMISPRLIVIRSFDVNKPGAEIEDLKGGVAGGSILNGVFKLGDE 352

  Fly   228 IEL-PAL---GEQRKVKSIQMFRKNVTS----------ASMGDRIG--------LCVTQFNAKLL 270
            ||: |.:   .::.|::...:| .|:.|          |..|..||        ||    .|..|
Yeast   353 IEIRPGIVTKDDKGKIQCKPIF-SNIVSLFAEQNDLKFAVPGGLIGVGTKVDPTLC----RADRL 412

  Fly   271 ERGIITQPGYLKPIYAVCLQFKPIRYY--------KEVIKSMRKMHISVGHNTVMANVTLFRDTD 327
            ...::...|:|..||...    .|.|:        |...:...|:.....:..:|.|:       
Yeast   413 VGQVVGAKGHLPNIYTDI----EINYFLLRRLLGVKTDGQKQAKVRKLEPNEVLMVNI------- 466

  Fly   328 GTTSTFQLDKEYEYMEDVQPAEVQHNDVIYALLQFESPVLSPPHSTLIASKLDMDVHSTSCRLAF 392
            |:|:|              .|.|.......|.||..||..:..:..:..|: .::.|        
Yeast   467 GSTAT--------------GARVVAVKADMARLQLTSPACTEINEKIALSR-RIEKH-------- 508

  Fly   393 WGRIAWQT 400
            |..|.|.|
Yeast   509 WRLIGWAT 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEFSecNP_611584.1 SelB_euk 5..192 CDD:206676 58/215 (27%)
SelB 6..467 CDD:225815 106/463 (23%)
SelB_II 196..278 CDD:293897 22/111 (20%)
eSelB_III 283..396 CDD:294009 21/120 (18%)
GCD11NP_010942.1 PTZ00327 74..524 CDD:240362 106/463 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3276
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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