DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEFSec and eefsec

DIOPT Version :10

Sequence 1:NP_611584.1 Gene:eEFSec / 37444 FlyBaseID:FBgn0034627 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001032513.2 Gene:eefsec / 641497 ZFINID:ZDB-GENE-051120-72 Length:576 Species:Danio rerio


Alignment Length:569 Identity:260/569 - (45%)
Similarity:350/569 - (61%) Gaps:61/569 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 INFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHL------ 61
            :|||:|:|||||||||:||:||||.:|||||||||||.|||||||||||...|..|.||      
Zfish     8 LNFNVGVLGHVDSGKTSLARALSSTASTAAFDKNPQSKERGITLDLGFSAFTVPLPEHLRESCGE 72

  Fly    62 PQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVI 126
            .|.:.||||.|||||||||||||||||||||||:||||..||.||||||||:||:|...:::|::
Zfish    73 KQYDSLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDVVKGMQTQTAECLLIGQLTCSRMVVIL 137

  Fly   127 NKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQG----------THIAELREVL 181
            ||.|:.|.::|...::|:..|:.||||.|.| ...||.||:|..|          ..|.||.::|
Zfish   138 NKTDLLPSDKRQVAIDKMTKRMHKTLENTRF-KDCPIIAVAAKPGGPEAPDTDEPQGITELIDLL 201

  Fly   182 REAYFQPQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFR 246
            :...|.|.|:.:..|.|.|||||.|:|||||.|||:|||.:.||:.:|:|||...|||||:||||
Zfish   202 KAQSFLPHRDPSGSLLMAVDHCFSIRGQGTVITGTILQGSLSVNDNVEIPALKVTRKVKSVQMFR 266

  Fly   247 KNVTSASMGDRIGLCVTQFNAKLLERGIITQPGYLKPIYAVCLQFKPIRYYKEVIKSMRKMHISV 311
            |.|.||..|||:|:|||||:.||||||::..||.|:.:||..:..:.|.||:..:.|..|.||:|
Zfish   267 KPVASAMQGDRVGVCVTQFDPKLLERGVVCTPGSLQTLYAAIISVQKIEYYRGALNSRAKFHITV 331

  Fly   312 GHNTVMANVTLFR---------DTDGTT-----STFQLDKEYEYMEDVQPAEVQ---HNDVIYAL 359
            ||.||||.::.|.         |:..|:     ::|..|.|:.::::...::.:   .....:||
Zfish   332 GHETVMARISFFNRVLPANENGDSKPTSQEQSANSFSFDWEFHHLDEHLTSQAEGGKGEPQQWAL 396

  Fly   360 LQFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGRIAWQTHSSKYFQEELPKLRIFKRKQKVGS 424
            |:||.||..||...:|.|:||.|:|..:|||||.|::........|.:..||:|:|.|.|||.|:
Zfish   397 LEFERPVTCPPLCLVIGSRLDSDIHGNTCRLAFHGKLLEGFEDKNYTETALPRLKISKDKQKEGA 461

  Fly   425 IQRVVNSSEVIVQNLF-KDAKRDLYVGKNVELSTGEKGRIERTFGQTSKVAITFQDALSPETIS- 487
            ::||.:...||.:||| |:....|:||..|.|||||.|.||..|||:.|:.|...:.|..||.. 
Zfish   462 VERVTDDYTVIGRNLFKKETNLQLFVGLKVTLSTGEAGSIEGGFGQSGKIKIRIPEGLKEETKQL 526

  Fly   488 -------------------------NVKNVKVLLNCKKYVFNKQAGLFQ 511
                                     :.:.|.:.||.|:|:::....:.|
Zfish   527 LSSSSKKKGKGGSKNESPKLEEAKPDAQPVTIHLNFKRYIYDPHKKMVQ 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEFSecNP_611584.1 SelB_euk 5..192 CDD:206676 116/202 (57%)
SelB_II 196..278 CDD:293897 53/81 (65%)
eSelB_III 283..396 CDD:294009 43/129 (33%)
eefsecNP_001032513.2 SelB_euk 10..202 CDD:206676 112/192 (58%)
SelB_II 216..298 CDD:293897 53/81 (65%)
eSelB_III 303..433 CDD:294009 43/129 (33%)

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