Protein Alignment eEFSec and CG4849

DIOPT Version :9

• Sequence 1: NP_611584.1
• Gene: eEFSec / 37444
• FlyBaseID: FBgn0034627
• Length: 511
• Species: Drosophila melanogaster
• Sequence 2: NP_651605.1
• Gene: CG4849 / 43358
• FlyBaseID: FBgn0039566
• Length: 975
• Species: Drosophila melanogaster
• Alignment Length: 571
• Identity: 117/571 - (20%)
• Similarity: 194/571 - (33%)
• Gaps: 175/571 - (30%)

  Fly     2 PINFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQ-----------------SVERGITLDLG 49
            |:..|:.|:||:..||||....|  |..|     :||                 ..|||.::..
  Fly   129 PLIRNVALVGHLHHGKTTFVDCL--IRQT-----HPQFETMEERQLRYTDTLFTEQERGCSIKA- 185

  Fly    50 FSGLLVDAPAHLPQGEQLQFTFV----DCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAE 110
                   .|..|...:..|.:::    |.|||.:.........::.|.::|.:||.:|....|..
  Fly   186 -------TPVTLVLQDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTER 243

  Fly   111 CLIIGELLQKKLIVVINKID------VYPENQRASKLEKLRLRLAKTLEATTFGGQVP------- 162
            .|......::.:.|.|||||      ..|......||:.:...:...|  :|:|  .|
  Fly   244 LLKHAVQERQAITVCINKIDRLILELKLPPQDAYFKLKHIVEEVNGLL--STYG--APDDNLLVS 304

  Fly   163 -----ICAVSALQG-------------------THIAELREVLREAYF----------QP----Q 189
                 :|..|:|.|                   .::...:.:..:.||          ||    |
  Fly   305 PILGNVCFASSLYGFCFTLKSFAKLYADTYEGVAYLDFAKRLWGDMYFNSKTRKFSKKQPHNSAQ 369

  Fly   190 RN----LADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVT 250
            |:    :.:|::..:....|  ...|..:.||.:..|:|:.        |:.| .:|:...:.|.
  Fly   370 RSFVEFILEPMYKLIAQVVG--DVDTTLSDTLAELNVRVSK--------EEMK-SNIRPLLRLVC 423

  Fly   251 SASMGDRIG---LCVTQF-----NAKLLERGIITQPGYLKPIYAVCLQFKPIRYYKEVIKSMRKM 307
            :..|||..|   :||...     |||.....|.|.|             |....|:::|...:..
  Fly   424 NRFMGDCSGFVDMCVEHIKSPLENAKRKVDHIYTGP-------------KEGDIYRDMISCNQYG 475

  Fly   308 HISVGHNTVMAN--VTLF----RDTDGTTSTFQ----LDKEYEYMEDVQPAEVQHNDVIYALLQF 362
            .:.|..:.:..|  .|.|    |...||....|    |.:.|...::.....:|    :..|..|
  Fly   476 TLMVHSSKMYPNDDCTFFQVLARIVSGTLHAGQEVRVLGENYTLQDEEDSRILQ----VGRLWVF 536

  Fly   363 ESPV-----LSPPHSTLIASKLDMDVHSTSC--------RLAFWGRIAWQTHS------SKYFQE 408
            ||..     ..|..:.::...:|..:..||.        .|..:..:.:.|.|      ......
  Fly   537 ESRYKVELNRVPAGNWVLIEGIDQCIVKTSTIVDINVPEDLYIFRPLKFNTQSIIKIAVEPVNPS 601

  Fly   409 ELPKLRIFKRKQKVGSIQRVVNSSEVIVQNLFKDAKRDLYVGKNVELSTGE 459
            ||||:....||         ||.|..::....:::      |::|.|.|||
  Fly   602 ELPKMLDGLRK---------VNKSYPLLSTRVEES------GEHVILGTGE 637

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
eEFSec	NP_611584.1	SelB_euk	5..192	CDD:206676	53/262 (20%)
		SelB	6..467	CDD:225815	116/567 (20%)
		SelB_II	196..278	CDD:293897	21/89 (24%)
		eSelB_III	283..396	CDD:294009	23/135 (17%)
CG4849	NP_651605.1	EFTUD2	4..111	CDD:292623
		PTZ00416	115..957	CDD:240409	117/571 (20%)
		Snu114p	132..340	CDD:206730	47/226 (21%)
		Translation_Factor_II_like	477..568	CDD:295476	19/94 (20%)
		snRNP_III	589..660	CDD:293921	16/64 (25%)
		EF2_IV_snRNP	660..837	CDD:238840
		eEF2_C_snRNP	832..911	CDD:239765

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45464564
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930