DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEFSec and mEFTu2

DIOPT Version :10

Sequence 1:NP_611584.1 Gene:eEFSec / 37444 FlyBaseID:FBgn0034627 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster


Alignment Length:333 Identity:91/333 - (27%)
Similarity:155/333 - (46%) Gaps:64/333 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NIGLLGHVDSGKTTLAKALSSISSTAA---------FDKNPQSVERGITLD---LGFSGLLVDAP 58
            |:|.:||||.|||||..|::.|.|...         .|:.|:...||||::   :|:|       
  Fly    59 NVGTIGHVDHGKTTLTAAITRIQSQKGLAEYLSYDQIDRAPEEKARGITINACHIGYS------- 116

  Fly    59 AHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQ-KKL 122
                 ..:..:...||||||..|:.:|.||..:|..:|||.|..|:..||.|.|::.:.:. :::
  Fly   117 -----TTERTYAHTDCPGHADYIKNMISGASQMDGAILVVAATDGQMPQTREHLLLAKQVGIQRI 176

  Fly   123 IVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGG-QVPICAVSALQGTH-------IAELRE 179
            ||.|||.|:..:    ..||.:.:.:.:.|....|.| ..|:...|||....       :..:.:
  Fly   177 IVFINKADLVDQ----EVLELVEIEMREMLSDFGFDGVNSPVICGSALLALREDKSEFGVPSIEK 237

  Fly   180 VLR--EAYF-QPQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRK--V 239
            :|.  ::|. .|||:::.|..:.:|:.|.:.|:|||..||:.:|.:..|...:|....:..|  :
  Fly   238 LLEQCDSYIPTPQRDISSPFILPIDNAFTVPGRGTVVVGTIKRGTIPRNADADLLGFNQNLKTSI 302

  Fly   240 KSIQMFRKNVTSASMGDRIGLCVTQFNAKLLERGII----------------------TQPGYLK 282
            ..||:|||:|..|..|:.:|..:.......:|||::                      .:.|.:|
  Fly   303 SDIQIFRKSVPQAQAGENVGALLRGIKISAVERGMLLCATGSEDISNHFEGSMYLLSRAEGGRVK 367

  Fly   283 PIYAVCLQ 290
            |:.:..:|
  Fly   368 PMLSKYIQ 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEFSecNP_611584.1 SelB_euk 5..192 CDD:206676 62/209 (30%)
SelB_II 196..278 CDD:293897 24/105 (23%)
eSelB_III 283..396 CDD:294009 2/8 (25%)
mEFTu2NP_610288.1 TufA 53..436 CDD:439820 91/333 (27%)

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