DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEFSec and eefsec

DIOPT Version :9

Sequence 1:NP_611584.1 Gene:eEFSec / 37444 FlyBaseID:FBgn0034627 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_002933127.3 Gene:eefsec / 100489728 XenbaseID:XB-GENE-1010963 Length:576 Species:Xenopus tropicalis


Alignment Length:569 Identity:258/569 - (45%)
Similarity:349/569 - (61%) Gaps:61/569 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 INFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQG--E 65
            :|||:|:|||:|||||:||||||:.:|||||||||||.|||||||||||...|..|.||...  :
 Frog     8 LNFNVGVLGHIDSGKTSLAKALSTTASTAAFDKNPQSKERGITLDLGFSSFSVPIPEHLAGTGYQ 72

  Fly    66 QLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINKID 130
            :||||.|||||||||||||||||||||||:||:|..||.|||:||||:||::...|::||:||||
 Frog    73 RLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACNKMVVVLNKID 137

  Fly   131 VYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSA----------LQGTHIAELREVLREAY 185
            :..||:|.:.::|:..::.||||.|.|.|. ||.:|:|          :.|..:::|.|:|....
 Frog   138 LLAENKRQAAIDKMTKKMQKTLENTKFHGS-PIISVAAKPGGPEAPESVTGLGVSDLIELLMSHT 201

  Fly   186 FQPQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVT 250
            :.|||:...|..|.|||||.|||||||.|||:|.|.:.:|:.:|:|||...:||||:|||.|.|:
 Frog   202 YLPQRDPQGPFLMAVDHCFSIKGQGTVMTGTILSGSISLNDNVEIPALKVTKKVKSMQMFHKPVS 266

  Fly   251 SASMGDRIGLCVTQFNAKLLERGIITQPGYLKPIYAVCLQFKPIRYYKEVIKSMRKMHISVGHNT 315
            .|..|||:|:|||||:.||||||::..|..|..|:|..:....|.|||..:::..|.||:|.|.|
 Frog   267 QAVQGDRLGICVTQFDPKLLERGLVCTPESLHTIHAAIISVNKIPYYKGSLQTKAKFHITVSHET 331

  Fly   316 VMANVTLFR------DTDGTTSTFQLDKEYEYME-----DVQPAEV------QHNDVI----YAL 359
            |||.||.|.      :.:...:.|...|||.|.:     |.:.:|.      |..:.|    :||
 Frog   332 VMAKVTFFSLPPASFNEELPANVFDFGKEYLYQDGYISKDSKNSEQNKVDNHQGEEAIPKQQWAL 396

  Fly   360 LQFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGRIAWQTHSSKYFQEELPKLRIFKRKQKVGS 424
            |:||.||..|....:|.||||.|:||.:|||||.|.:........|.:..||.|:::|.|.|.|.
 Frog   397 LEFEKPVTCPKLCLVIGSKLDTDIHSNTCRLAFHGVLIEGVEDKNYSESFLPNLKVYKLKHKEGQ 461

  Fly   425 IQRVVNSSEVIVQNLF-KDAKRDLYVGKNVELSTGEKGRIERTFGQTSKVAITFQDALSPE---- 484
            ::||.:...:|.::|| |:....|:||..|:|||||.|.||.:|||:.|..|...:.|.||    
 Frog   462 VERVNDDYCIIGRSLFKKETNIQLFVGLKVKLSTGEDGVIEGSFGQSGKFKIRIPNGLQPETKKM 526

  Fly   485 -TISNVKNVK---------------------VLLNCKKYVFNKQAGLFQ 511
             |.|:.|.:|                     :.|..|:|:|:.|..:.|
 Frog   527 LTASSKKRLKGKGDADPAKEEEVRQDNQPILITLWFKRYMFDPQKKMIQ 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEFSecNP_611584.1 SelB_euk 5..192 CDD:206676 113/198 (57%)
SelB 6..467 CDD:225815 238/494 (48%)
SelB_II 196..278 CDD:293897 48/81 (59%)
eSelB_III 283..396 CDD:294009 49/133 (37%)
eefsecXP_002933127.3 SelB_euk 10..201 CDD:206676 110/191 (58%)
SelB_II 212..294 CDD:293897 48/81 (59%)
eSelB_III 299..433 CDD:294009 49/133 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 210 1.000 Domainoid score I2776
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11073
Inparanoid 1 1.050 447 1.000 Inparanoid score I1590
OMA 1 1.010 - - QHG55121
OrthoDB 1 1.010 - - D370293at33208
OrthoFinder 1 1.000 - - FOG0007177
OrthoInspector 1 1.000 - - oto102476
Panther 1 1.100 - - LDO PTHR43721
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5287
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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