Protein Alignment: CG4266 and scaf4

• Sequence 1: NP_001097394.1
• Gene: CG4266
• FlyBaseID: FBgn0034598
• Length: 1306
• Species: Drosophila melanogaster
• Sequence 2: XP_012813473.1
• Gene: scaf4
• XenbaseID: XB-GENE-920206
• Length: 1340
• Species: Xenopus tropicalis
• Alignment Length: 1500
• Identity: 457/1500 (30%)
• Similarity: 615/1500 (41%)
• Gaps: 402/1500 (27%)

  Fly     1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKVPGLYV 65
            |:.|.|||.||..|.|.:||||:|||..|||:|::||||||||||.|||||.|||||||||||||
 Frog     1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYV 65

  Fly    66 IDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKNNVFKSEVIQP 130
            |||||||||||:|:|||:|.|||.:|||.||..|:.|..||||:|:|||||||||.|||.|:|||
 Frog    66 IDSIVRQSRHQFGIDKDVFGPRFTKNLTATFQCLYTCPSEDKSKIVRVLNLWQKNGVFKIEIIQP 130

  Fly   131 IFDLADPNHPIYHQMPPVGGSGGQGGGV---------GPGPSSSGALS-----------LADISS 175
            :.|:|               :|.....|         |..|.|...||           :|.:..
 Frog   131 LLDMA---------------AGAAAADVMTDSSMMEEGSSPPSGMILSEPPDEVQEPPPVAPVPQ 180

  Fly   176 GPNGLNSSGMEISMNSSGGDDKMGGAMPDLSLGHEKFGGGSSSSKRHYSEQHYSKRQSVVSCSSK 240
            .|.....:.:.....|:.|.        .|....:.|............|..:::.|::.|..:.
 Frog   181 LPTPDAFAAVAQLFQSTQGQ--------QLQQILQTFQQPPKPQSPAIDENVFAQVQAITSQLNA 237

  Fly   241 TSKSHHHKREYVKSSHDIDYQVREIIEEEDEGLQMLMADDHHCMGDDSPPTSSNLLDEKKIKQLL 305
            .:.....|..:.|.....||.     :|.|       |.:.......|||.|.:...:..::...
 Frog   238 PAHQPERKTAFDKLLDRFDYD-----DEPD-------ATEESKKEASSPPLSGSQQSQPPLQPFA 290

  Fly   306 NNPNVLR----------QLHTLQNFQNL---KPQEENQKHRYQDEALQQHFQNVMKGN------- 350
            .:.:.::          |:..:..||.:   .||          |.|.|..|....|.
 Frog   291 FSADSMQPAAYPGQLPGQVPNMDQFQPMMMGMPQ----------EPLPQQTQLPPNGQMLGFGMV 345

  Fly   351 -----AGMPPGMG-----------MGMNMNDSMDLNKDVEFISEQQTIEVINLDGGDSRSPTPDR 399
                 |.|.|.||           ..|..|: |.:.|:     .||.:.:      |...|....
 Frog   346 PTQSFAPMVPPMGSEPSTHGFQNTFQMQPNE-MHVQKE-----HQQEMPM------DVEQPNVQE 398

  Fly   400 DRYKRSRRNSRSRTRSPRGRGAGGGTGNDRRRRGTRSRSRSRSPRSSRRRGSRDRDRMDRSNRDK 464
            :: :.....|:|.:|||:.|         |.|.|:||| |||..||..|  ||||.|....:|.:
 Frog   399 NK-RHMNEQSKSVSRSPKRR---------RSRSGSRSR-RSRHRRSRSR--SRDRRRHSPKSRSQ 450

  Fly   465 E-RDREHERERRKKGLPDIKKEHLSVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRG 528
            | ||||.|:|||:||||.||.|.:|:||||||:|.|.|...|:::.....|:|.|.||:.|.|||
 Frog   451 ERRDREKEKERRQKGLPPIKSETVSICSTTLWIGQLDKKTTQQDVGSFLEEFGPIESINMIPPRG 515

  Fly   529 CAFIVMNRRQDAHKAMQALK--NHKLQGRAITISWAAGKGVKSKEWKDYWDLELGVTYIPWSKLS 591
            ||:|||..||||::|:..|.  |.|:..:||.|:||..||:|: |:|.|||:|:|||||||:|:.
 Frog   516 CAYIVMVHRQDAYRALMKLSRGNVKVNQKAIKIAWALNKGIKA-EYKQYWDVEIGVTYIPWNKVK 579

  Fly   592 SDTDFDALEEGGMFDEDTM-----PIQMK-QKINQAKNAAKEHKGASIAEAAGAPSV----GVPP 646
            .: |.:...||||.|.||:     |:..| :..:.::|.|.|.||  :.||:.||.|    .:|.
 Frog   580 PE-DLENFCEGGMLDNDTLCPEWKPLAKKPEPKDVSQNGAAETKG--VGEASPAPQVLPLLSIPI 641

  Fly   647 PNLIFGIDTTQPPPVGPVGPVGPPPGPGAPPPGLMGMVRGQFPMAPPMGI----------NMPPP 701
            ...|.|:   |.||:.|:  ....|.|..|.|| :..|:|   :.||.|:          .||.|
 Frog   642 RAPIPGM---QVPPLQPM--TAHQPVPSIPTPG-VPTVQG---LPPPQGLPPLQGVPPLQGMPLP 697

  Fly   702 IMMPPTNMPPPMMMP-TTNMPP-----------PMMMPPTMMPPGF-PGIGGPP------HPMAL 747
            ..:||..:|.|..|| ...|||           |...|..:.|||| ||:..||      :||.:
 Frog   698 QGLPPQGLPLPQGMPLPQGMPPHQPIPGMGPLQPPAFPIGIPPPGFAPGVPPPPFMRPGFNPMHM 762

  Fly   748 PPGAPFPPPGAVPP-------PIPSGGQISNSGNVSDDQMDIEMDLEDAPPLP---------PQQ 796
            |||. .||||..||       |:|:.|....:........|...|:....|.|         ..:
 Frog   763 PPGF-LPPPGLPPPMTPPVSIPLPTPGINIPTSTADTSSNDSSKDVSRTNPSPMVPVRDNMEEDE 826

  Fly   797 QAN----FNPSPSNVDLSPAAMANEMFQQRDRERDRDNRDRSRG--PG-------NSRWGGRDDV 848
            :|:    :.|:||....:.....|.:...:..|:.. |..:::|  ||       ....|.|...
 Frog   827 KADNGNGYKPTPSGGPNNAPGPLNPLHGDQQGEQGL-NSGQAQGAHPGPPQGPFSGQPQGPRHGT 890

  Fly   849 VEAAERWRAENG----------------------GGGGGPGSG----------LGPNAAFNEARA 881
            .|.|.:...|..                      |...||..|          |||...     .
 Frog   891 TEGAHQGPQEGSHQGPPEDTDHSPPGGRHYTLPEGPHHGPSEGHHHSPSEGPHLGPTEG-----P 950

  Fly   882 RLNLNPIEHGMPR--------------PDFMDFDNRGGPGGPRGMGPRGNHNG------------ 920
            ||......||.|.              |:.:   :.|.|.||....|.|.::|
 Frog   951 RLGPEGPHHGPPEGSHHGPQEHPHHGPPEGL---HHGPPEGPHHGTPEGQYHGPPEGPYHGPPEG 1012

  Fly   921 ---GGPGGDFF-PPNMNHNRFNQPTSLMQMRIPPPASFNQRMGGPAG-----NGGNGVGPMFMRN 976
               |.|.|.|. ||   |..::.         ||...|:   |.|.|     :.|...||.....
 Frog  1013 PYHGPPDGPFHGPP---HGPYHG---------PPQGPFH---GPPQGPYQGPHHGPPQGPHHGPP 1062

  Fly   977 QG---GGPGG------AGPSGGGPGGAGTG-----------GGGPG--GRQQGPG--------FF 1011
            ||   |.|.|      .||..|.|.|.|:|           |..||  ..|:.||        |.
 Frog  1063 QGPHHGPPQGPHHGPPQGPHHGPPQGPGSGPHPGPPSTGLLGARPGLIPLQRPPGIPSSNMQRFP 1127

  Fly  1012 NPRNPFNDNQRGRG---GQSG-----GGVRGVGGGGGGGPGGRGRWSDDEDEGGNNFKRRGGPGG 1068
            ..:.|...:...||   ||.|     .|:||...|.|..|..||      .||      .|||..
 Frog  1128 MSQRPGPPHMMNRGPPPGQGGFGMPPHGIRGPLLGQGHFPRQRG------PEG------HGGPEE 1180

  Fly  1069 PGGNRFRGER-----GGEMMDDRRGNNSRGGRGGPREDRERPGFGNRRGSRDDSNRHSISSTDEG 1128
            ..|.:|||||     |.|  .||.|..|.|     |.:.||..||.|   .||.:.
 Frog  1181 RDGRQFRGERPVFPHGRE--PDRFGRRSFG-----RNEDERERFGRR---FDDPDH--------- 1226

  Fly  1129 NKAASETEPKPKNVETELGSTNTGAPAAATRVDTEE--DWDQELQDYEARMEAQKPGERASQSAN 1191
                   |..|....:..|   .|:|:...:.|:||  .|....:     .|...|..|.....|
 Frog  1227 -------ERPPSRGRSSWG---RGSPSRDRQRDSEERNRWPMGHE-----RERGHPRGRGDFLEN 1276

  Fly  1192 SPPQEKLPAENENFAKPADVTGDPLVAKSQTETSAACTPLYDELPPPAVPQTP---TQPPKEPQG 1253
            ..|..:|...::.|:...      ..|::.||..........:.||...|:||   .:..|:|..
 Frog  1277 RKPDAELDENHKPFSSRM------RNAETVTERKEGKAEPAGKNPPEEQPETPKSSEEAEKDPGS 1335

  Fly  1254 SPPRP 1258
            :|.:|
 Frog  1336 NPAKP 1340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4266	NP_001097394.1	CID	7..125	CDD:239621	88/118 (75%)
		RRM	<488..>593	CDD:223796	55/107 (51%)
		RRM_SCAF4_SCAF8	490..566	CDD:240673	38/78 (49%)
		DUF2413	1147..>1254	CDD:287302	24/112 (21%)
		Herpes_DNAp_acc	<1206..1304	CDD:282746	12/56 (21%)
scaf4	XP_012813473.1	RPR	6..134	CDD:214731	94/128 (73%)
		RRM	<446..>554	CDD:223796	55/108 (51%)
		RRM_SF	475..555	CDD:302621	39/80 (49%)
		SelP_N	<924..967	CDD:282453	12/48 (25%)
		SelP_N	<950..1007	CDD:282453	13/60 (22%)
		PRP38_assoc	<1196..1272	CDD:289628	27/110 (25%)
		DUF1777	1197..>1329	CDD:285811	38/172 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930				C358651268
eggNOG	1	0.900				E1_KOG0132
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000				FOG0001380
OrthoInspector	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030		avgDist	Average_Evolutionary_Distance	R1302
TreeFam	1	0.960
	5	4.820