| Sequence 1: | NP_001097394.1 | Gene: | CG4266 / 37411 | FlyBaseID: | FBgn0034598 | Length: | 1306 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038943887.1 | Gene: | Scaf4 / 245924 | RGDID: | 727896 | Length: | 1226 | Species: | Rattus norvegicus |
| Alignment Length: | 1420 | Identity: | 421/1420 - (29%) |
|---|---|---|---|
| Similarity: | 557/1420 - (39%) | Gaps: | 427/1420 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKVPGLYV 65
Fly 66 IDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKNNVFKSEVIQP 130
Fly 131 IFDLADPNHPIYHQMPPVGGSGGQGG--------GVGPGP-SSSGALSLADISSGPNGLNSSGME 186
Fly 187 ISMNSSGGDDKMGGAMPDLSLGHEKFGG---------GSSSSKRHYSEQHYSKRQS--------- 233
Fly 234 ---VVSCSSKTSKSH--HHKREYVKSSHD-IDYQVREIIEEEDEGLQMLMADD-----HHCMGDD 287
Fly 288 SPPT-------------SSNLLDEKKIKQLLNNP--NVLRQLHTL-QNFQNLKP-----QEENQK 331
Fly 332 HRY---------------------------------------QDEALQQHFQNVMKGNAGMP--- 354
Fly 355 ----------------------------PGM---GM---GMNMNDSMDLNKDVEFISE------- 378
Fly 379 --QQTIEVINLDGGDSRSPTPDRDRYKRSRRN-SRSRTRSPRGRGAGGGTGNDRRRRGTRSRSRS 440
Fly 441 RSPRSSRRRG-SRDRDR---MDRSNRDKERDREHERERRKKGLPDIKKEHLSVCSTTLWVGHLSK 501
Fly 502 LVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQALK--NHKLQGRAITISWAAG 564
Fly 565 KGVKSKEWKDYWDLELGVTYIPWSKLSSDTDFDALEEGGMFDEDTMPIQMKQKINQAKNAAKEHK 629
Fly 630 GASIAEAAGAPSVGVPPPNLIFGIDTTQPPPVGPV-GPVGPPPGPGAPP--PGLMGMVRGQFPMA 691
Fly 692 PPMGINMPPPIMMPPTNMPPPMMMPTTNMPPPMMMPPTMMPPGFPGIGGPPH--PMALPPGAPFP 754
Fly 755 --PPGAVPPPIPSGGQISNSGNVSDDQMDIEMDLEDAPPLP---------------PQQQANFNP 802
Fly 803 --SPSNVDLSPAAMANEMFQQRDRERDRDNRDRSRGPGNSRWGGRDDVVEAAERWRAENGGGGGG 865
Fly 866 PGSGLGPNA-AFNEARARLNLNPIEH--GMPRPDFMDFDNRGGPGGPRGMGPRGNHNG--GGPGG 925
Fly 926 DFFPPNMNHNRFNQPTSLMQMRIPPPASFNQRMGGPAGNGGNGVGPMFMRNQGGGPGGAGPSGGG 990
Fly 991 PGGAGTGGG-----------------------------------GPGGRQQ-GPGFFNPRNPFND 1019
Fly 1020 NQR----GRGGQSGGGVRGVGGGGGGGPGGRGRWSDDEDEGGNNFKRRGGPGGPGGNRFRGERGG 1080
Fly 1081 EMMDDRRGNNSRGGRGGPREDRERPGFGNRRGSRDDSNRHSISSTDEGNKAASETEPKPKNVE-- 1143
Fly 1144 -TELGSTNTGAPAAATRVDTEEDWDQELQDYEARMEAQKPGERASQSANSPPQEK 1197 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG4266 | NP_001097394.1 | CID | 7..125 | CDD:239621 | 86/117 (74%) |
| RRM | <488..>593 | CDD:223796 | 57/106 (54%) | ||
| RRM_SCAF4_SCAF8 | 490..566 | CDD:240673 | 38/77 (49%) | ||
| DUF2413 | 1147..>1254 | CDD:287302 | 13/51 (25%) | ||
| Herpes_DNAp_acc | <1206..1304 | CDD:282746 | |||
| Scaf4 | XP_038943887.1 | CID_SFRS15_SCAF4 | 5..135 | CDD:340802 | 93/129 (72%) |
| PRK07994 | <124..>266 | CDD:236138 | 36/183 (20%) | ||
| RRM_SCAF4 | 574..654 | CDD:409894 | 40/79 (51%) | ||
| SF-CC1 | 1075..>1166 | CDD:273721 | 25/100 (25%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166343049 | |
| Domainoid | 1 | 1.000 | 133 | 1.000 | Domainoid score | I4962 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0132 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 459 | 1.000 | Inparanoid score | I1515 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 1 | 1.000 | - | - | FOG0002970 | |
| OrthoInspector | 1 | 1.000 | - | - | otm44781 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X1964 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 10 | 9.840 | |||||