Sequence 1: | NP_001097394.1 | Gene: | CG4266 / 37411 | FlyBaseID: | FBgn0034598 | Length: | 1306 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491403.1 | Gene: | nrd-1 / 172064 | WormBaseID: | WBGene00017004 | Length: | 988 | Species: | Caenorhabditis elegans |
Alignment Length: | 1419 | Identity: | 343/1419 - (24%) |
---|---|---|---|
Similarity: | 481/1419 - (33%) | Gaps: | 561/1419 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 METVV--AFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKVPGL 63
Fly 64 YVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKNNVFKSEVI 128
Fly 129 QPIFDL---------------------ADPN--HPIYHQMPPVGGSGGQ------------GGGV 158
Fly 159 GPGPSSSGALSLADISSGPN---------GLNSSGMEISMNSSGGDDKMGGAMPDLSL---GHEK 211
Fly 212 FGGG-SSSSKRHYSEQHYSKRQSVVSCSSKTSKSHHHKREYVKSSHDIDYQVREIIEEEDEGL-- 273
Fly 274 -------QMLMADDHHCM------------------GDDSPPTSS----------NLLDEKKI-- 301
Fly 302 ----KQLLNNPNV--LRQLHTLQNFQNLKPQEENQKHRYQDEALQQH---FQN-VMKGNAGMPP- 355
Fly 356 GMGMGMN--MNDSMDLNKDVEFISEQQTI----------EVINLDGGDSRSPTPDRDRYKRSRRN 408
Fly 409 SRSRTRSPRGRGAGGGTGNDRRRRGTRSRSRSRSPRSSRRRGSRDRDRMDRSNRDKERDREHERE 473
Fly 474 RRKKGLPDIKKEHLSVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQ 538
Fly 539 DAHKAMQALKNHKLQGRAITISWAAGKGVKSKEWKDYWDLELGVTYIPWSKLSSDTDFDALEEGG 603
Fly 604 MFDEDTMPIQMKQKINQAKNAAKEHKGASIAEAAGAPSVGVPPPNLIFGIDTTQPPPVGPVGPVG 668
Fly 669 PPPGPGAPPPGLMGMVRGQFPMAPPMGINMPPPIMMPPTNMPPPMMMPTTNMPPPMMMPPTMMPP 733
Fly 734 GFPGIGGPPHPMALPPGAPFPPPGAVPPPIPSGGQISNSGNVSDDQMDIEMDLEDAPPLPPQQQA 798
Fly 799 NFNPSPSNVDLSPAAMANEMFQQRDRERDRDNRDRSRGPGNSRWGGRDDVVEAAERWRAENGGGG 863
Fly 864 GGPGSGLGPNAAFNEARARLNLNPIEHGMPRPDFMDFDNRGGPGGPRGMGPRGNHNGGGPGGDFF 928
Fly 929 PP---NMNHNRFNQPTSLMQMRIPPPASFNQRMGGPAGNGGNGVGPMFMRNQGGGPGGAGPSGGG 990
Fly 991 PGGAGTGGGGPGGRQQGPG-FFNPRNPFNDNQRGRGGQSGGGVRGVGGGGGGGPGGRGRWSDDED 1054
Fly 1055 EGGNNFKRRGGPGGPGGNRFRGERGGEMMDDRRGNNSRGGRGGPREDRERPGFGNRRGSRDDSNR 1119
Fly 1120 HSISSTDEGNKAASETEPKPKNVETELGSTNTGAPAAATRVDTEEDWDQELQDYEARMEAQKPGE 1184
Fly 1185 RASQSANSPPQEKLPAENENFAKPADVTGDPLVAKSQTETSAACTPLYDELPPPAVPQTPTQPPK 1249
Fly 1250 EPQGSPPRPAPPVIETEAAPHEESVPAPPAELQTEAPSAEEPIAPAASADVVAE 1303 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4266 | NP_001097394.1 | CID | 7..125 | CDD:239621 | 61/117 (52%) |
RRM | <488..>593 | CDD:223796 | 27/104 (26%) | ||
RRM_SCAF4_SCAF8 | 490..566 | CDD:240673 | 16/75 (21%) | ||
DUF2413 | 1147..>1254 | CDD:287302 | 15/106 (14%) | ||
Herpes_DNAp_acc | <1206..1304 | CDD:282746 | 25/98 (26%) | ||
nrd-1 | NP_491403.1 | RPR | 8..136 | CDD:214731 | 65/129 (50%) |
RRM_SCAF4_SCAF8 | 523..599 | CDD:240673 | 16/75 (21%) | ||
RRM | <524..>597 | CDD:223796 | 16/72 (22%) | ||
Drf_FH1 | <738..>787 | CDD:283903 | 21/85 (25%) | ||
Extensin_2 | 740..>787 | CDD:252669 | 20/83 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160160570 | |
Domainoid | 1 | 1.000 | 64 | 1.000 | Domainoid score | I6768 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0132 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 268 | 1.000 | Inparanoid score | I1854 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG28830 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002970 | |
OrthoInspector | 1 | 1.000 | - | - | oto20700 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105962 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1302 |
SonicParanoid | 1 | 1.000 | - | - | X1964 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.780 |