DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

powered by:

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Isha and Scaf8

DIOPT Version :10

Sequence 1:	NP_001097394.1	Gene:	Isha / 37411	FlyBaseID:	FBgn0034598	Length:	1306	Species:	Drosophila melanogaster
Sequence 2:	NP_598884.2	Gene:	Scaf8 / 106583	MGIID:	1925212	Length:	1268	Species:	Mus musculus

Alignment Length:	22	Identity:	8/22 - (36%)
Similarity:	12/22 - (54%)	Gaps:	1/22 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 SEFEGFSSGSEILTKHADRWHK 24
            |.|..|.:| |:.:....|||:
Mouse   359 SVFYCFLNG-EVRSAARKRWHR 379

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Isha	NP_001097394.1	PHA03247	<1187..1306	CDD:223021
		CID_SCAF8_like	6..135	CDD:340780	6/19 (32%)
		RRM_SCAF4_SCAF8	490..566	CDD:409674
Scaf8	NP_598884.2	CID_SCAF8	5..135	CDD:340801
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	270..290
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	322..355
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	385..469
		RRM_SCAF8	475..553	CDD:409895
		PHA03247	<611..1079	CDD:223021
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	776..807
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	984..1012
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1040..1065
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1199..1268
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.