DRSC/TRiP Functional Genomics Resources

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Protein Alignment tapas and tdrd6a

DIOPT Version :10

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001410719.2 Gene:tdrd6a / 565665 ZFINID:ZDB-GENE-041001-210 Length:2117 Species:Danio rerio


Alignment Length:702 Identity:142/702 - (20%)
Similarity:272/702 - (38%) Gaps:141/702 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   577 MIDQIANFEELTK----HIGRQMESPH--FRQKVSKPYAQEVYLVEMPDGWNRVRAISVDEETRS 635
            :::...||:|..|    .:.::::.|.  |.:....|  .::.||::.:.|.|.|.:|.|.:..|
Zfish    29 LVEFWGNFDEDRKFAYQQLKKEIQYPREGFSESDGNP--GDLCLVQVYETWYRARIVSRDSDEYS 91

  Fly   636 GRYHFIDFG-------DVAMFHSEDLFHCPPQFLALPAQAVCLSMYALDKFEDHPHALQVL--TK 691
              ...||.|       :...:...|.|:.||:.      ..|:...||....::..:...|  .|
Zfish    92 --VFLIDEGRTLRAAVNTLAWGKSDFFYLPPEV------EFCILANALPLSPENNWSSMALEFMK 148

  Fly   692 ELDGQTV---VAHVLTTEKQF-LELGGSAQGVVENGKRRACLVATLYDTSTAEDIHLNDLVAKRI 752
            ...|:.|   |..||...:.| |::              .||...:::...|:.::.:..:...:
Zfish   149 TFCGRRVNATVQDVLVAHRTFLLDI--------------PCLSRQMFEMGFAKKLYSDQFMEFVV 199

  Fly   753 TKCTPAPSLSDEKKIG--KTTPILVSHINDDGDLMVL--LRNDDLKFVE--------------RS 799
            .....:...||.|:|.  :|.|:.:....:.....:.  |:.|.::.|.              :.
Zfish   200 RSLQASTGTSDLKRISSIRTKPVEIIEQKEKQQAYMFPELQTDTVETVVITEVTSPFRIFCQLKV 264

  Fly   800 IAQTVADLGEQDRVSYSDLLHDRHIFVCDETV---------DGVKQWFRGRLVTRPLNPDEESFD 855
            .:|.:..|.||....|...:..  .|...|.:         ||  :|:|.  |.:.:.......:
Zfish   265 FSQELKKLTEQITQYYEGRVGS--YFARAENLGSPCASRGSDG--KWYRS--VLQQVMSANNVVE 323

  Fly   856 VYYVDDGRQRKAHISNIYRLEANNRALATFPPQAIPVRLHDVPEIG----GHMLHRLRGLIPWRT 916
            |.:||.|:::...:.|:..|.:.   ....|.......||.:.:.|    ...:..|:.|:..||
Zfish   324 VLHVDYGKKQFVQVENVKPLASE---FFRMPVVTYVCSLHGIVDKGVGWTASQIDYLKSLLLNRT 385

  Fly   917 E-ALLKVVAMDGGKPLVNVFIREDPESMYMCVNIGLRLELEMASSIHPEKYDHTLLSSNVQLPRR 980
            . |..:..::..|...|.::..|:       .||....||:...|:..   |.||....||    
Zfish   386 VIAKFQYQSLSEGVHYVTLYGEEN-------TNINKLFELKPKCSLDS---DMTLADFAVQ---- 436

  Fly   981 GSFSSVFSNQSSSSDLVATTPPVTPEKKPSARSTGSTFSSLMLKDYEAIPAVGAYF--------- 1036
                     :|.||           :|...:|:|.||..:....|.:....|  :|         
Zfish   437 ---------KSPSS-----------QKSKISRTTESTHINETYSDLKVNKPV--FFTETLTPNST 479

  Fly  1037 EVRVALSV-NPGHFAVQPYKYYNQLQTLMKNLQE-HCQKTAAKGV--QPSQLAIGEAYAAPDSEG 1097
            .:.|...| :||.|.:|..:|.::...||..|.. :...|:.:.:  :|   .:|...||...:|
Zfish   480 HMAVVQHVDSPGKFWIQTQRYADEFDLLMNGLGNLYSDPTSTESLIRKP---VVGLICAAKAQDG 541

  Fly  1098 VYHRVSIHKIYDEIIHVRFVDVGDDGVIACDQLKTLNPELRKLPKMALPAQLYGIQLTDVVWSKE 1162
            |::|.:::|:.|:...|.|:|.|:..|:....|:.|....::||.:|:...|:|::....:|.:.
Zfish   542 VFYRAAVYKVIDKTAEVYFLDYGNTEVVDSFNLRQLPLRFQQLPAVAVKCSLHGVKPRLKLWEER 606

  Fly  1163 NCVRFRELSLGQKFIGIVRRMTKQKDGGRALCLELVDTSTPKDIKLHEILIN 1214
            ..:.|.:| :..:.|.: ....||:|   ...::|||.|...:..:.::|.|
Zfish   607 ATLFFSKL-VRDRIIDL-HVQDKQQD---THIVQLVDPSLDGEKDVSKLLCN 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:425754 23/108 (21%)
TUDOR 769..896 CDD:425754 25/151 (17%)
TUDOR 1034..1151 CDD:425754 32/129 (25%)
tdrd6aNP_001410719.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1125..1216
Blue background indicates that the domain is not in the aligned region.

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