DRSC/TRiP Functional Genomics Resources

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Protein Alignment tapas and tdrd1

DIOPT Version :10

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001157500.1 Gene:tdrd1 / 553522 ZFINID:ZDB-GENE-070803-1 Length:1176 Species:Danio rerio


Alignment Length:947 Identity:192/947 - (20%)
Similarity:342/947 - (36%) Gaps:252/947 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 TGNVVTNPKVKVPLKFDPSLDPVSTLNFYCAANDFEKPAYNIFNKLRNLHCSVQIAGDVYSSYPQ 428
            ||....:|:...|..::..|         .|::..:.|..:...|..:.:|     |||.|| ||
Zfish    21 TGPSSLSPRGPAPAIYEERL---------LASDVLDGPKIDTMRKDISQNC-----GDVLSS-PQ 70

  Fly   429 EFTDKETAYQRTAQIAIQRIMHAQSHQKLSACTFSDVEFIDGLYKELLKHPHGILGHKLEDW--Y 491
                  ||.....|:.  ::.:..|||....||            ...|..:..:..:.:||  :
Zfish    71 ------TAVSMMGQVV--KLCNYCSHQGNLRCT------------RCKKTCYCSVACQTQDWIAH 115

  Fly   492 GSTFRQHLPSHWYDLIVKSNKIRVEHGIDPRIILFANDPGSSEPDRTSITTLPQMV----LPWQS 552
            ....:..:|.      |.|.|.:     :.:.:.:||..|.::....|:...|:.:    |..:.
Zfish   116 RHVCKPSIPE------VTSEKPK-----ESKAVPYANGLGGTQAKEISVDAQPKRIYRRDLHKKV 169

  Fly   553 SEGGS---------HDWNMFISFCDSTKIVWARMIDQIANFEELTKHIGRQMESPH---FRQKVS 605
            ...||         .:..||...|...:::            |..|.|.:|::..:   |.|:. 
Zfish   170 VSKGSEIKGTVIDLRNPGMFSIHCQCEEMI------------ESLKKITQQLQKTYCSSFAQEY- 221

  Fly   606 KPYAQEVYLVE--MPDGWNRVRAISVDEETRSGRYHFIDFG---DVAMFH----SEDLFHCPPQF 661
            ||...|:..|:  :...|.|....:||...::....:||||   :||:.|    ||::...||  
Zfish   222 KPEVGELCAVKFSLDQNWYRAEIQAVDVARKTAGVFYIDFGNEENVALDHIRPLSENIDAVPP-- 284

  Fly   662 LALPAQAVCLSMYALDKFEDHPHALQVLTKELDGQTVVAHVLTTEKQFL---ELGGSAQGVVENG 723
            .||..   |::            .::.||....|:..:|     .:|.:   .|..:...::.:|
Zfish   285 FALQC---CIA------------GVKPLTGSWTGECCIA-----VRQLIAGKSLTFTVLDIMNDG 329

  Fly   724 KRRA--CLVAT--------LYDTSTA--EDI--------HLNDLVA------KRI-------TKC 755
            ...|  .||:|        |.|.|.|  ||:        .:|.|:.      ||.       ::.
Zfish   330 DLLAVDSLVSTLGKHVSTFLIDQSYAIKEDVPVKTQTEHSINSLLTASFENFKRFSGGKNENSEA 394

  Fly   756 TPAPSLSDEKKIGKTTPILVSHINDDGDLMV-LLRNDDLKFVERSIAQTVADLGEQDRV-----S 814
            .|...|:  :.:|.:...:|:|:....:::. .|.|          |..:..|....||     :
Zfish   395 RPPEPLT--QGVGDSFTAVVTHLQSPSEILCQKLEN----------ASIIQQLQMNLRVHCSNTA 447

  Fly   815 YSDLLHDRHIFVCDETVDGVKQWFRGRLVTRPLNPDEESFDVYYVDDGRQRKAHISNIYRLEANN 879
            .||........||........||:|.:::.   ...|:...|.|:|.|...:..::.:..:....
Zfish   448 ASDDFRPAPGTVCCSLFSEDNQWYRAKVLA---YSSEDRVCVGYIDFGNSEEVELNRLRPISKEL 509

  Fly   880 RALATFPPQAIPVRLHDVPEIGGHMLHRLRGLIPWRTEALL-------------KVVAMDGGKPL 931
            .||||   ||||..|..:..:..          .|..||:|             :::....|:.|
Zfish   510 LALAT---QAIPCSLAGIKSLTD----------TWSDEAVLMLKHLVCNRFIRVEILGKKDGRAL 561

  Fly   932 VNVFIR-EDPESMY--MCVNIGLRLELEMASSIHPEKYDHTLLSSNVQLPRRGSFSSVFSNQSSS 993
            |::... .||::..  :.||:|                                |:::.|.::..
Zfish   562 VSMIDESSDPQASVTELLVNMG--------------------------------FAAIESVETKK 594

  Fly   994 SDL-VATTPPVTPEKKPSARSTGSTFSSLMLKDYEAIPAVGAYFEVRVALSVNPGHFAVQPYKYY 1057
            ::. .||:..:.|..:|.......|.:.|        |..|...|:.::...:...|....|...
Zfish   595 NEPDPATSTEIPPLSQPVVEKLEWTGAEL--------PFDGQKVELVISTLKSLDEFYCYNYSKT 651

  Fly  1058 NQ--LQTLMKNLQEHCQKTAAKGVQPSQLAIGEAYAAP-DSEGVYHRVSIHKIYDE-IIHVRFVD 1118
            ::  |..:...|.:||:...|    |....:||...|. ..:..::|..:.::..| ...|.|||
Zfish   652 DEHTLTEMSFELMKHCESERA----PFTPIVGEPCCALFTGDARWYRAMVLEVCGEGKARVCFVD 712

  Fly  1119 VGDDGVIACDQLKTLNPELRKLPKMALPAQLYGIQLTDVVWSKENCVRFRELSLGQKFIGIVRRM 1183
            .|:...:....||.:...|.|||..|:...|.|::..:..|.||..:||:.|..||...|.|..:
Zfish   713 YGNSCEVDAAHLKAITQSLLKLPFQAIRCWLAGVEPVEGQWKKEAMLRFQALCAGQPLSGKVLSI 777

  Fly  1184 TKQKDGGRALCLELVDTSTPKDIKLHEILINEKHAQP 1220
            |::..|     :||.....    .:..:||:|..|:|
Zfish   778 TEKGYG-----MELESAGQ----TVASVLISEHLAKP 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:425754 30/121 (25%)
TUDOR 769..896 CDD:425754 29/132 (22%)
TUDOR 1034..1151 CDD:425754 27/120 (23%)
tdrd1NP_001157500.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 3/10 (30%)
zf-MYND 83..119 CDD:460312 8/47 (17%)
Tudor_TDRD1_rpt1 178..306 CDD:410479 34/157 (22%)
Tudor_TDRD1_rpt2 429..510 CDD:410480 16/83 (19%)
Tudor_TDRD1_rpt3 674..732 CDD:410481 12/57 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 828..853
Tudor_TDRD1_rpt4 881..995 CDD:410482
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1061..1090
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1116..1137
Blue background indicates that the domain is not in the aligned region.

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