DRSC/TRiP Functional Genomics Resources

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Protein Alignment tapas and vret

DIOPT Version :10

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_651092.1 Gene:vret / 42695 FlyBaseID:FBgn0263143 Length:691 Species:Drosophila melanogaster


Alignment Length:730 Identity:136/730 - (18%)
Similarity:246/730 - (33%) Gaps:222/730 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 KETRDRAVTETIFVTIENKKAPVMNGHGPRHVKVANGQDKHNDGKPPLRAILGNSASQRQQDTST 284
            ||...|.::...||..||            ...:...|.:.......::.|.|....:|:     
  Fly    85 KEMEFRRLSRVYFVYFEN------------IASLETAQQRVQRYPNLIKCITGRPQKERE----- 132

  Fly   285 VYHSPESSFKRPRHPRVMYPGHQRTTGVSVNHRLKVTPQSDAPTPAVAPITPPAS--PEYAQTTT 347
            :...|.:|.:....|.   |....|....|||..:|            ||:....  ||:.:...
  Fly   133 ITSDPVTSTEPMPTPG---PAISATERTPVNHNREV------------PISTGGQNHPEFFRPPL 182

  Fly   348 AAKATYKEDIHGGQGETGNVV-TNPKVKVPLKFDPSLDPVSTLNFYCAANDFEKPAYNIFNKLRN 411
            ..|..||.         |::: ||             ||:.  .:.....:|....::|: ||::
  Fly   183 VTKDDYKR---------GSLLATN-------------DPIQ--RYLNVKYEFALERHDIY-KLKD 222

  Fly   412 LHCSVQIAGDVYSSYPQEFTDKETAYQRTAQIAIQRIMHAQSHQKLSACTFSDVEFIDGLYKELL 476
                                  ||   |..|:    ::|.:|.:.:...|.:..|  :...|.| 
  Fly   223 ----------------------ET---RIPQV----VLHFRSGRTIPLSTVAVTE--EDKTKSL- 255

  Fly   477 KHPHGILGHKLEDWYGSTFRQHLPSHWYDLIVKSNK-----------IRVEH----------GID 520
                      |||......   :..:|.|...|..|           :..:|          .:|
  Fly   256 ----------LEDGVSKCV---VCQNWTDTFCKLCKMPFCNASCFADVAEQHKQACGKGEILNLD 307

  Fly   521 PRIILFANDPGSSEPDRTSITTLPQMVLPWQSSEGGSHDWNMFISFCDSTKIVWARMID---QIA 582
            .::......||                ||...|:       :.|:..:.|.:|:.|..|   .||
  Fly   308 EKVGRKYPKPG----------------LPPSGSK-------VRITAFEQTNVVYVRSADIQIDIA 349

  Fly   583 NFEELTK--HIGRQMESPHFRQKVSKPYAQEVYLVEMPDGWNRVRAISVDEETRSGRYHFIDFGD 645
            .:..||:  .:|:...     :..|.|...::.|.:.....:|...::|| ..:.....|||||.
  Fly   350 YYTVLTEVMMLGKDAS-----KLQSTPVCGQIVLYKFEGHMSRAMVLNVD-NIKEIYVVFIDFGS 408

  Fly   646 VAMFHSEDLFHCPPQFLALPAQAVCLSMYALDKFEDHPHALQVLTKELDGQTVVAHVLTTEKQFL 710
            |.:...|.|:.|......|....|.:.:..:.:....|:..:|: .||| |::|.::..:.::: 
  Fly   409 VEVTQLERLYECSSYLAGLTCYPVAVKLRGVPRRFVGPNIREVM-YELD-QSLVFNIKYSSREY- 470

  Fly   711 ELGGSAQGVVENGKRRACLVATLYDTSTAEDIHLNDLVAKRITKCTPA-PSLSDEKKIGKTTPIL 774
                      :..|....:|.|..|.:.:    ||.|..   |..||. ||:||........|.:
  Fly   471 ----------DTSKGMQVVVMTEIDINRS----LNRLFK---TILTPVEPSVSDLGYKEDCLPYI 518

  Fly   775 VSHINDDGDLMVL-----------LRNDDLKFVERSIAQTVADLGEQ--DRVSYSDLLHDRHIFV 826
            ..|...:.:::|:           ..:.||.:....:.:.:.:.||:  ...:|:..:::    :
  Fly   519 PLHCGKNINVVVMDNTFIQCGFIYCTSIDLAYEVTKMQRDIQEYGEKIAKCATYAPPINE----L 579

  Fly   827 CDETVDGVKQWFRGRLVTRPLNPDEESFDVY----YVDDGRQRKAHISNIYRLEANNRALATFPP 887
            |....:|  :|.||..|       |...|.|    ::|.|.....|:::|          ..:||
  Fly   580 CIAKYEG--KWRRGLSV-------ELVGDGYPSILFIDYGNIVPTHVTDI----------RPYPP 625

  Fly   888 QAI-PVRLHDVPEIG 901
            |.| |:....:..||
  Fly   626 QFIFPIMTTQLDLIG 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:425754 27/114 (24%)
TUDOR 769..896 CDD:425754 26/144 (18%)
TUDOR 1034..1151 CDD:425754
vretNP_651092.1 TUDOR 322..438 CDD:425754 28/128 (22%)
Tudor_vreteno-like_rpt1 371..424 CDD:410515 14/53 (26%)
TUDOR 524..640 CDD:425754 24/138 (17%)
Tudor_vreteno-like_rpt2 576..631 CDD:410516 17/77 (22%)
Blue background indicates that the domain is not in the aligned region.

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