DRSC/TRiP Functional Genomics Resources

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Protein Alignment tapas and Tdrd6

DIOPT Version :10

Sequence 1:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001154838.1 Gene:Tdrd6 / 210510 MGIID:2679727 Length:2135 Species:Mus musculus


Alignment Length:770 Identity:165/770 - (21%)
Similarity:282/770 - (36%) Gaps:200/770 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   530 PGSSEPDRTSITTLPQMVLPWQSSEGGSHDWNMF-------------ISFCDSTKIVWARMIDQI 581
            ||:|...|.|...:...|:|.|.       |.:.             |....:|:..||      
Mouse    10 PGASLALRVSFVDVHPEVIPVQL-------WGLVGQRREEYVRLSREIQEAAATRGPWA------ 61

  Fly   582 ANFEELTKHIGRQMESPHFRQKVSKPYAQEVYLVEMPDGWNRVRAISVDEETRSGRYHFID---- 642
                     :|....||           .|:.||::...|:|.|.:|  .:.:..|...:|    
Mouse    62 ---------LGGASASP-----------GELCLVQVGLMWHRCRVVS--RQAQDSRVFLLDEGRT 104

  Fly   643 ----FGDVAMFHSEDLFHCPPQFLA------LPA---------------QAVCLSMYALDKFEDH 682
                .|.:|...|| .||.|.:.|.      :||               :||.. :..|...|.|
Mouse   105 ITAGAGSLAPGRSE-FFHLPSEVLGCVLAGLVPAGGGGTGGGEPQQWSPRAVDF-LSNLQGKEVH 167

  Fly   683 PHALQVLTKELDGQTVVAHVLTTEKQFLELGGSAQGVVENGKRRACLVATLYDTSTAEDIHLNDL 747
            ...|.||   |..:.|:..|....:|..|| |.|:.|.::   ..|.:...|.|:..:    ...
Mouse   168 GRVLDVL---LLHRLVLLEVPVVSQQMEEL-GLARQVPDS---LFCSLLKRYLTAAGQ----GSS 221

  Fly   748 VAKRITKCTPA---PSLS---DEKKIGKTTPILVSHINDDGDLMVLLR--NDDLKFVERSIAQTV 804
            .|..:.:..|.   |.|.   .:.::|.|.|::|:.:.....:...||  :.::..:..|:||..
Mouse   222 GAPVLPRAAPKQEHPGLDYFYPQLQLGVTEPVVVTQVCHPHRIHCQLRSLSQEIHRLSESMAQVY 286

  Fly   805 -ADLGEQDRVSYSDLLHDRHIFVCDET------------VDGVKQWFRGRLVT--RPLNPDEESF 854
             |.:|..|..|.|....:|     :|:            :||  ||:|..|:.  ||    :...
Mouse   287 RAPVGTDDEDSGSATWEER-----EESPDKPGSPCASCGLDG--QWYRALLLETFRP----QRCA 340

  Fly   855 DVYYVDDGRQRKAHISNI-YRLEANNRALATFPPQAIPVRLHDVPEIGGHMLHRLRGLIPWRTEA 918
            .|.:||.||:.....|:: |.|....|    .|....|..|:.:.:.|       ||   |....
Mouse   341 QVLHVDYGRKELVSCSSLRYLLPEYFR----MPVVTYPCALYGLWDCG-------RG---WSRSQ 391

  Fly   919 LLKVVAMDGGKPLVNVFIRE--DPESMYMC-------VNIGLRLELEMASSIHPEKYDHTLLSSN 974
            :..:.|:..|: .||..|..  ..|.||..       :|:.....::.....     |..|.|..
Mouse   392 VGDLKALILGQ-AVNAKIEFYCSFEHMYYVTLYGEDGINLNSAFGVQSCCLA-----DWFLQSQG 450

  Fly   975 VQLPR---RGSFSSVFSNQSSSSDLVATTPPVTPEKKPSARSTGSTFSSLMLKDYEAIPAVGAYF 1036
            ::...   .....:.|.:||.:.::.|..      ..||.|       |:.||       :..::
Mouse   451 IEEEEEEDEDEVEAAFQSQSPAEEMEAEV------SLPSLR-------SIRLK-------MNTFY 495

  Fly  1037 EVRVALSVNPGHFAVQPYKYYNQLQTLMKNLQEHCQ--KTAAK--GV----QPSQLAIGEAYAAP 1093
            :.:|....:|..|.::..|:.|....|.|.:   |.  .:|:|  ||    :|..|.     ...
Mouse   496 DAQVEFVKSPSEFWIRLRKHKNTFSKLTKRM---CSFYSSASKLDGVILRPEPDDLC-----CVK 552

  Fly  1094 DSEGVYHRVSIHKIYDEIIHVRFVDVGD-DGVIACDQLKTLNPELRKLPKMALPAQLYGIQLTDV 1157
            ..|..|:|.::.::..:.:.|..||.|: :.|..|| ::.|.|:.|:||.:||...|..|.....
Mouse   553 WKENGYYRATVTRLDSKSVDVFLVDRGNSENVDWCD-VRMLLPQFRQLPILALKCTLADIWPLGK 616

  Fly  1158 VWSKENCVRFRELSLGQKFIGIVRRMTKQKDGGRALCLELVDTSTPKDIKLHEIL 1212
            .||:|....|::..|.::.  :|..:.||   .....:|::|.|...:..:.:::
Mouse   617 TWSQEATSFFKKTVLHKEL--VVHVLDKQ---DHQYVIEILDESRMGEENISKVI 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:425754 28/151 (19%)
TUDOR 769..896 CDD:425754 35/144 (24%)
TUDOR 1034..1151 CDD:425754 32/125 (26%)
Tdrd6NP_001154838.1 Tudor_TDRD6_rpt1 6..136 CDD:410491 33/161 (20%)
Tudor_TDRD6_rpt2 239..379 CDD:410492 36/154 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..315 7/32 (22%)
Tudor_SF 494..628 CDD:470623 37/142 (26%)
Tudor_SF 771..891 CDD:470623
Tudor_SF 980..1104 CDD:470623
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1271..1296
Tudor_SF 1312..1426 CDD:470623
Tudor_SF 1524..1666 CDD:470623
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1699..1733
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1860..1885
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1930..1985
Blue background indicates that the domain is not in the aligned region.

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